| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1894 |
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| Symbol | ihfA |
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| ID | 8132837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2187366 |
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| End bp | 2187662 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644865183 |
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| Product | integration host factor subunit alpha |
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| Protein accession | YP_003017471 |
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| Protein GI | 253688281 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.585308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGCTTA CTAAAGCTGA AATGTCAGAA TACCTGTTTG AGAAGCTCGG GCTGAGCAAA
CGGGATGCCA AAGAGCTAGT CGAGCTGTTT TTTGAAGAAG TTCGTCGCGC TTTGGAAAAT
GGCGAGCAGG TCAAGTTGTC AGGTTTTGGC AATTTTGATT TGCGAGACAA GAACCAACGT
CCGGGACGTA ACCCAAAAAC TGGCGAAGAT ATTCCGATTA CGGCGCGCCG TGTGGTCACG
TTCCGTCCGG GGCAAAAGCT AAAAAGTAGG GTAGAGAACG CCTCTCCCAA AGAGTAA
|
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| Protein sequence | MALTKAEMSE YLFEKLGLSK RDAKELVELF FEEVRRALEN GEQVKLSGFG NFDLRDKNQR
PGRNPKTGED IPITARRVVT FRPGQKLKSR VENASPKE
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