Gene PC1_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1855 
Symbol 
ID8132798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2142486 
End bp2143118 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content55% 
IMG OID644865144 
ProductPEBP family protein 
Protein accessionYP_003017432 
Protein GI253688242 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.165132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAAC TCTCCAGCCA CAGTTTTCAG GACGGCGAAA CTATCCCAGG CGAGTTTGCC 
TTTGCCGTAC CGGATGCAAA TAACCACATT GCGCTGTCTT CTAATCACAA TCCCCACTTT 
GCCTGGCGCG ACGCGCCCGC AGGGACACAG TCTTTTGTGT TGATCTGCCA CGATCCGGAT 
GTCCCCAGCC GTGGTGACGA TGTGAATCAG GAAGGTCGCG AGGTTAGCGC GTCTCTGCCA 
CGTGTCGATT TCTACCACTG GCTATTGTTG GATATTCCGG CCAACGTCAG TGAGATTCCC 
GCCTCTTCGC ATTCCAATAC GATTACCCCA CGTGGGAAAG CAGGCCCGGA TGCGCCAACA 
GGCCTCAGAC ACGGCATTAA TGATTACACC GCCTGGTTTG CCACAGACGA GCAGATGAAA 
GGCACCTACT ATGGCTATGA TGGCCCTTGC CCGCCGTGGA ACGATGCACT GGTCCATCAC 
TACGTCTTCA CGCTTTACGC CCTCGCAACG CCATCTTTAG CGATAGAAGG TGAGCTTAAC 
GGAGCAAATG TTCGTGCTGC GCTCGCTAAC GCCCCCGTAT TAGCAGAAGC GAAACTCACT 
GGGCTGTATA CGCTGAACCC AGCATTATTG TGA
 
Protein sequence
MLQLSSHSFQ DGETIPGEFA FAVPDANNHI ALSSNHNPHF AWRDAPAGTQ SFVLICHDPD 
VPSRGDDVNQ EGREVSASLP RVDFYHWLLL DIPANVSEIP ASSHSNTITP RGKAGPDAPT 
GLRHGINDYT AWFATDEQMK GTYYGYDGPC PPWNDALVHH YVFTLYALAT PSLAIEGELN 
GANVRAALAN APVLAEAKLT GLYTLNPALL