Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1775 |
Symbol | |
ID | 8132717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2047795 |
End bp | 2048643 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644865063 |
Product | hypothetical protein |
Protein accession | YP_003017352 |
Protein GI | 253688162 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTTTCA CACTCAAAAA GTTCGTCGGT GGCCTTCTGC AGCCTCTGCC ATTGCTATTG CTTCTGATGG GTGTTGGCCT GCTGCTGCTC TGGTTTACCC AACGGCAGCG CACGGGAAGA ACGATAATCT TAGCCAGTTG GCTGGCGCTG ATTCTGCTCA GCCTGCAACC TGTCGCCGAT AGGCTGCTGT TACCACTGGA ATCACACTAC CCAACCTGGC GGCAAGCGCC GCAGGCGAAC AAAGTCGACT ATATTGTCGT GCTAGGCGGA GGGTATACCT ATAACGCGGA ATGGGCACCC AGTTCCAATT TGATCAGCAA CAGCCTCCCG CGCGTGACGG AAGGGATTCG CCTTTATCAT GCCAACCCCG GCGCAAAATT AATTTTTACT GGCGGCGCAG CGCAAGGTAA CCCTGTCAGC AGTGCGAAAA CCGCTGCGCT GGTCGCAGAA AGTCTGGGTA TTCCTCAACA GGACATCGTC ATTCTGGATA CGCCAAGGGA TACGGAAGAA GAAGCGGCGG CAACCGCTAA GATTGTTGGC GATCGCCCTT TCTTGCTGGT GACCTCGGCA AACCACCTGC CTCGCGCCAT ACGGTTCTTC CAGGCCCAGG GGCTTGCACC GATTCCGGCT CCGGCGAATC AGATGGCGAT CACCTCTGCG CTCAACCCAT GGGAGAAAGT CTTTCCTTCC GCTTACTATT TATCGCACAG CGAACGCGCC TGGTATGAAA CACTCGGTCG CCTCTGGCAA GCGCTGAAAG GAACGTCGGC AACACCACAC AGCGCCGAAC AACCACAGGC TCACTCCAGC CAAGGGGACA GCTCTCGGGA AGCCACATCA AAGAGCTGA
|
Protein sequence | MLFTLKKFVG GLLQPLPLLL LLMGVGLLLL WFTQRQRTGR TIILASWLAL ILLSLQPVAD RLLLPLESHY PTWRQAPQAN KVDYIVVLGG GYTYNAEWAP SSNLISNSLP RVTEGIRLYH ANPGAKLIFT GGAAQGNPVS SAKTAALVAE SLGIPQQDIV ILDTPRDTEE EAAATAKIVG DRPFLLVTSA NHLPRAIRFF QAQGLAPIPA PANQMAITSA LNPWEKVFPS AYYLSHSERA WYETLGRLWQ ALKGTSATPH SAEQPQAHSS QGDSSREATS KS
|
| |