| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1749 |
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| Symbol | |
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| ID | 8132691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2019851 |
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| End bp | 2021455 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644865037 |
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| Product | signal transduction histidine kinase regulating citrate/malate metabolism |
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| Protein accession | YP_003017326 |
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| Protein GI | 253688136 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000244457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTGA GACTTTCCTT TCATATCAAA TTATTTATCT ATTTGATCGT CTTCTTCTCT
GCGTTACTTC TGATGACAGG CATTTATTAT TACCACGATA TCGATAAGCA GCTGTATTCC
GAGTTGGGTA CGCGCGCGCA GGTGCAGGCC AGAGAGATCG CCATCATCCC AACGCTGGTG
GAATCGGTAA AAAATAGAGA TATTAAACAG ATATATACCC TCGCTCAGCA ATTAAAACAG
CGTAGTGATG CCAGCTATAT CGTGGTCGGT GATAACCAGG CGCGTCATCT GTTTCATTCT
GAATACGCGG AAAGCGATAA GCTCGTCGGC ACGCAAATGG TCGGCGGAGA TAATTTCGAC
GTACTCGCGG GAAAAAGCGT GATTACCGTG CGTCACGGTA GCATAGGTGT CTCACTACGC
AGCAAAGCAC CGATCATCGC TGACGGTCAG GTTATCGGTA TTGTCTCCGT TGGTTATCTG
AAAACTCACA TCGACAACCT GACCTTCAGT AAACTGGCGC ACATTCTGTT GGCCATTCTG
GCGCTCTTTG TCGCACTGTT TATCTTTTCC TGGTGGTTCT CGCGGAATCT GAAAAAGCAG
ATGTTTGGCC TCGAACCCCT TGAGATTCGC ATGTTGGTCA GGCAACAGAA AGCACTGCTT
GAATCGATCT ATGAAGGGGT CATCGCCATC GACAAACAGC ATCGCATCGC CGCCATTAAC
CATGCGGCCA AAGAGATCCT CGGGCTAAAC GAACCGTCCT ATCTGTTGCG CGGCAAACCG
ATTGATACCG TCATTAAACC CGTGCCTTTT TTCTCTGGCG AGGCCATGTG GAACAGCGAC
ACCCACGATG AGATCTGCCG TTTTAACCAT GCCACCGTGA TTGCCAGTCG GGTACGGATT
ATGCTGGAAG ATGAACTTCA GGGCTGGGTC ATCAGCTTCC GCAGCAAAAA CGATATCCAT
ACGCTTAGCA TGCAGCTTAG TCAGGTAAAG CGTTATGCAA ACAGTCTGCG TATTCTGCGG
CATGAGCAGT TGAACTGGAC AGCAACGCTG GCCGGGCTCC TGCATCTAAA ACGTTATGAC
GAAGCGATAA AATATATTGA AGCACAGTCG GAAAGCGCCC AGGTAGTGCT GGATTTTGTT
TCCCGCCGCT TCTGTTCGCC CGCACTGTGC GGGTTACTGC TGGGTAAATA CGCAACGGCT
CGGGAAAAAG GCATTGAGAT TGTTTTCGAT CCACGCTGCC AGCTCACCCA TATTCCATCG
GCGCTAAGCG AGACGGAATT CATGTCCATC ATTGGTAATT TGCTGGATAA CGCGATGGAA
GCAACATTAG CCACTACAGC CCCACATTAT CCTGTCGAGG TGTATATCTA TGATAGCGAA
CAAGAACTGG TCATTGAGGT CGCCGATCAG GGAACGGGGA TCGATCCGGC GATTGCCGAT
AGGCTGTTTG AAATGGGCGT AACCAGTAAA ACGCAGGGCG ATCACGGGCT GGGGCTGCAT
CTGGTGTCTA GCTACGTTAA CCAGGCGCAG GGAATGATTG AAGTCTCGGC CAATCAGCCG
AATGGCAGCA TATTTTCCCT ATTTATACCG CTATCCCCCA AATAA
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| Protein sequence | MRLRLSFHIK LFIYLIVFFS ALLLMTGIYY YHDIDKQLYS ELGTRAQVQA REIAIIPTLV
ESVKNRDIKQ IYTLAQQLKQ RSDASYIVVG DNQARHLFHS EYAESDKLVG TQMVGGDNFD
VLAGKSVITV RHGSIGVSLR SKAPIIADGQ VIGIVSVGYL KTHIDNLTFS KLAHILLAIL
ALFVALFIFS WWFSRNLKKQ MFGLEPLEIR MLVRQQKALL ESIYEGVIAI DKQHRIAAIN
HAAKEILGLN EPSYLLRGKP IDTVIKPVPF FSGEAMWNSD THDEICRFNH ATVIASRVRI
MLEDELQGWV ISFRSKNDIH TLSMQLSQVK RYANSLRILR HEQLNWTATL AGLLHLKRYD
EAIKYIEAQS ESAQVVLDFV SRRFCSPALC GLLLGKYATA REKGIEIVFD PRCQLTHIPS
ALSETEFMSI IGNLLDNAME ATLATTAPHY PVEVYIYDSE QELVIEVADQ GTGIDPAIAD
RLFEMGVTSK TQGDHGLGLH LVSSYVNQAQ GMIEVSANQP NGSIFSLFIP LSPK
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