| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1739 |
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| Symbol | |
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| ID | 8132681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2010548 |
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| End bp | 2011324 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865027 |
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| Product | imidazole glycerol phosphate synthase subunit HisF |
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| Protein accession | YP_003017316 |
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| Protein GI | 253688126 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.22943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGGCAA AACGGATAAT CCCTTGTCTG GACGTGCGTA ACGGTCAGGT CGTCAAAGGT
GTGCAGTTCC GCAATCACGA AATCATCGGT GACATCGTGC CGCTGGCGCA GCGCTACGCG
CAGGAAGGTG CTGATGAGCT CGTGTTTTAT GATATTACCG CCTCTTCCGA TGGCCGAGTG
GTCGATAAAA GTTGGGTATC CCGCGTTGCC GAAGTTATCG ATATTCCCTT TTGCGTGGCA
GGCGGTATTA AAAGCGTGGA AGAAGCAGGT CAAATCCTCT CTTTCGGCGC GGATAAAATT
TCCATCAACT CACCGGCGTT GGCCGATCCA GAGCTGATTA CCCGACTGGC CGATCGTTAT
GGCGTGCAGT GCATCGTCGT CGGGATTGAT ACCTGGCACG ATGCCACGAC AGGTCGCTAC
CACGTTAATC AATACACAGG TGATGAAGCA CGTACCAAGG TCACCACCTG GGAAACGCTG
GACTGGGTAG AAGAAGTGCA AAAGCGCGGC GCGGGTGAGA TTGTGCTGAA CATGATGAAT
CAGGACGGCG TGCGCAACGG CTATGATTTA CACCAGCTCA ATCTGGTGCG TGATGTCTGC
AATGTTCCGC TTATTGCTTC CGGCGGCGCA GGCACCATGG AACATTTTCT GGATGCATTC
CAAACCGCTC ATGTAGATGG CGCGCTGGCA GCATCGGTGT TTCACAAGCA AATTATTAAT
ATTGGCGAGC TGAAACAATA TCTTAAGCAA CAAGGTGTGG AGATTCGAGT GTGTTAA
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| Protein sequence | MLAKRIIPCL DVRNGQVVKG VQFRNHEIIG DIVPLAQRYA QEGADELVFY DITASSDGRV
VDKSWVSRVA EVIDIPFCVA GGIKSVEEAG QILSFGADKI SINSPALADP ELITRLADRY
GVQCIVVGID TWHDATTGRY HVNQYTGDEA RTKVTTWETL DWVEEVQKRG AGEIVLNMMN
QDGVRNGYDL HQLNLVRDVC NVPLIASGGA GTMEHFLDAF QTAHVDGALA ASVFHKQIIN
IGELKQYLKQ QGVEIRVC
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