Gene PC1_1715 details

Gene Information

• Locus tag: PC1_1715
• ID: 8132657
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 1975676
• End bp: 1977415
• Gene Length: 1740 bp
• Protein Length: 579 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644865003
• Product: cysteine/glutathione ABC transporter membrane/ATP-binding component
• Protein accession: YP_003017292
• Protein GI: 253688102
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components
• TIGRFAM ID: [TIGR02868] thiol reductant ABC exporter, CydC subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.989561
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCAGA GAAAAACGAT GCAGGTATTA AAACCGTTTC TGGCGCTCTA CCGCCAGCAC 
ATCTGGCGCT TAAGTCTTGG TGTCGTGCTG GCTATTGCAA CCCTGCTTGC CAGTATCGGC 
CTGCTTGCCC TCTCCGGCTG GTTTCTTGCG GGGGCCGCAT TGGCAGGAAT CGTCGGGCTG 
CTCACCTTCA ACTATATGTT GCCTGCCGCA GGCGTGCGGG GTGCGGCGAT TGCGCGCACG 
GCTGGGCGCT ATTTCGAAAG AGTGGTCAGC CACGATGCCA CATTCCGCGT TCTGCTGCGC 
TTACGTGTTT TCACCTTTTC TCGCATTCTG CCGCTCTCTC CGGGTGGGCT GGCACAATTT 
CGCCAGGCTG AGTTGCTAAA CCGGCTTGTG GCGGACGTGG ATACGCTAGA CCACCTCTAT 
CTGCGCGTGA TTTCCCCCAT CATCAGCGCC TTCGCCGTCA TTCTTATTGT CTGTTACGGC 
CTGAGCTTCA TTGACGCCAC ATTGGCGTTG ACGCTTGGCA CTATCATGCT GGTACTGCTG 
CTGTGTCTGC CGGTTCTATT TTATCGGGCA GGAAATGGCA TCGGGCAGGA TCTGACCGCG 
CTGCGAGCAC AATACCGCCT CCAGCTAACG ACCTGGTTGC AAGGTCAGGC AGAGTTGACT 
GTCTTCGGTG CGCTCGATCG CGTCCGTCAG CAGCTGGCGC TGGTGGAAAT TAACTGGCTG 
CGCCGCCAAC GTCAGCAGGC CAATCTTACT GGCCTGTCTC AGGCGGTGAT GATTCTATGC 
AGCGGGCTGA CCGTTACCCT GATTCTGTGG CTAGCGGCAG ATGGCGTAGG CGGTAATCCA 
CAGCCCGGTG CCTTGATTGC ACTGTTCGTG TTTGCCGCGC TTGCCGCCTT CGAAGCGTTG 
GCTCCGGTCA CGGTGGCTTT CCAGCATATG GGGCAAGTGA TTGCTTCCGC CGCCCGAGTC 
GATCAAATCA TTCGCCAGCC CGTTGACGTC ACTTTCCCTG AGCGCGGGCC AGAAACGTCA 
CGTGAGGCCG CACTCGACCT CTCACATGTG GGGTTCACTT ACCCCGGTCA GCCACAGCCC 
GTGCTGCAAA ACATTTCTCT TTCCATTAAA CCGGGCGAAC ATCTGGCGCT GCTGGGGCGT 
ACCGGGTGCG GGAAATCGAC GCTATTGCAA CTGCTGACTC GGGCATGGAA TTGTGAATAC 
GGAGACATTA GGCTGAATGG CCACGCCCTT GTCGATTGGC GGGAAGCCGA CCTCCGTGCA 
ATGATGAGCG TGGTCCCACA GCGTGTGCAT ATTTTTAGCG CAACGCTGCG TGATAACCTG 
CTGCTGGCCG CACCAACGGC GCGGGACGAA AAACTGGCCG AGATATTACA GCAGGTCGGG 
TTGGAAAAAT TGCTGGAAAA TGAAGGGCTG AATGCCTGGC TGGGAGAAGG CGGTCGCCAA 
CTCTCCGGCG GTGAGCAGCG CCGTATCGCT TTAGCACGTG CCTTATTGCA CGACGCGCCG 
CTTGTTTTGT TGGATGAACC GACTGAAGGG TTGGATGCAG AGACTGAAAA ACGTATTCTG 
CAACTGCTAC GCCAACACTG TGCTGATAAG ACGCTGATTG TCATCACTCA CCGGTTATAC 
GGTTTAGAAT CAATGGATCG CATCTGTATT CTGGATGATG GCAAGGTGAT CGAACAGGGC 
AGCCATCAGG CGCTAATGGC ACAAAAAGGG CGTTATTGGC AATTCCGCCA ACACGTTTAA 

 

Protein sequence

MAQRKTMQVL KPFLALYRQH IWRLSLGVVL AIATLLASIG LLALSGWFLA GAALAGIVGL 
LTFNYMLPAA GVRGAAIART AGRYFERVVS HDATFRVLLR LRVFTFSRIL PLSPGGLAQF 
RQAELLNRLV ADVDTLDHLY LRVISPIISA FAVILIVCYG LSFIDATLAL TLGTIMLVLL 
LCLPVLFYRA GNGIGQDLTA LRAQYRLQLT TWLQGQAELT VFGALDRVRQ QLALVEINWL 
RRQRQQANLT GLSQAVMILC SGLTVTLILW LAADGVGGNP QPGALIALFV FAALAAFEAL 
APVTVAFQHM GQVIASAARV DQIIRQPVDV TFPERGPETS REAALDLSHV GFTYPGQPQP 
VLQNISLSIK PGEHLALLGR TGCGKSTLLQ LLTRAWNCEY GDIRLNGHAL VDWREADLRA 
MMSVVPQRVH IFSATLRDNL LLAAPTARDE KLAEILQQVG LEKLLENEGL NAWLGEGGRQ 
LSGGEQRRIA LARALLHDAP LVLLDEPTEG LDAETEKRIL QLLRQHCADK TLIVITHRLY 
GLESMDRICI LDDGKVIEQG SHQALMAQKG RYWQFRQHV