| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1694 |
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| Symbol | |
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| ID | 8132636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1954318 |
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| End bp | 1955283 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864982 |
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| Product | putrescine transporter subunit: membrane component of ABC superfamily |
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| Protein accession | YP_003017271 |
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| Protein GI | 253688081 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTAT TTCCCGAACG TAGCACGGCG GAACCACCGG GCAAGGCCAG ACTCTGGCTC
CGTGTGCTGA TGGCACGCTG GCGTCAAAAG CACGGACGTA AGCTGGTCAT TGCGCTGCCG
TATCTGTGGC TGCTGCTGCT GTTTATGCTG CCATTCCTGA TCGTGTTCAA AATCAGCCTT
GCAGAGATGG CGCGGGCGAT TCCGCCCTAT ACCGATCTGG TTTCCTGGAT GGACGACAAG
CTGGATATTT CCCTGAATCT TGGGAATTAC CTGCACTTGT TGGACGACCC GCTGTATTTC
GATGCCTATA TGCAATCGCT TCAGGTTGCT GCCGTGTCGA CGTTGTGCTG TCTGCTTATC
GGTTATCCGT TGGCTTGGGC GGTAGCGCAC AGCAAACCTT CAACGCGTAA TATCCTATTA
TTGTTGGTGA TTCTGCCATC GTGGACATCG TTCCTGATTC GCGTTTACGC CTGGATGGGG
ATTCTGAAAA ATAACGGCAT CCTGAATAAC TTCCTGCTGT GGCTGGGTGT GATCGATGAA
CCACTGGTCA TTCTGCATAC CAATTTGGCC GTTTATATTG GGGTCGTGTA CTCCTATCTG
CCGTTTATGG TGCTGCCGAT CTATACCGCG CTGATGCGGT TGGACTATTC GTTAGTGGAA
GCATCGTTGG ATCTGGGCGC TCGGCCGCTG AAAACCTTCT TCAGCGTGAT CGTCCCTTTA
ACGAAAGGCG GGATTATCGC GGGCTCGATG CTGGTCTTCA TCCCTGCGGT AGGGGAATAC
GTGATTCCAG AACTGCTCGG CGGGCCAGAT AGCATCATGA TTGGCCGTAT TTTGTGGCAG
GAATTCTTCA ATAACCGCGA TTGGCCGGTG GCGTCTGCCG TTGCCGTCGT TATGTTGCTG
CTATTGATTA TGCCGATTAT CTGGTTCCAC AAACATCAGA GCAAAAGTGC GGAGGGTGAG
GCGTGA
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| Protein sequence | MTLFPERSTA EPPGKARLWL RVLMARWRQK HGRKLVIALP YLWLLLLFML PFLIVFKISL
AEMARAIPPY TDLVSWMDDK LDISLNLGNY LHLLDDPLYF DAYMQSLQVA AVSTLCCLLI
GYPLAWAVAH SKPSTRNILL LLVILPSWTS FLIRVYAWMG ILKNNGILNN FLLWLGVIDE
PLVILHTNLA VYIGVVYSYL PFMVLPIYTA LMRLDYSLVE ASLDLGARPL KTFFSVIVPL
TKGGIIAGSM LVFIPAVGEY VIPELLGGPD SIMIGRILWQ EFFNNRDWPV ASAVAVVMLL
LLIMPIIWFH KHQSKSAEGE A
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