Gene PC1_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1623 
Symbol 
ID8132564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1871925 
End bp1872821 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content30% 
IMG OID644864910 
Producthypothetical protein 
Protein accessionYP_003017200 
Protein GI253688010 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.507454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA ATCTTGAGAG TTTGTTAGAG AAAATAAAAA AACATCCCCG ATATAAAAAA 
TATGATGGGA GGTTTCCTAC TCTGGGGACA CTTACGCGTT ATCCAGAAAA AAATCTTCCT 
ATCATTGTTG AGCAAGGGAA TAGACTCATT CATCCAAAAG AGTCAGATTT AAAAAACCAA 
GAAGACATAT CTTTTATAAC GGAACAATTT ATCTCTGACA TTTACCAATT CCTTACAGAA 
AGCCATATAT ATATCGAGGA TAAAACCATT GCTAGCTATG GGCAAAGCAT TATTACAAGT 
AATAAATTAT ACCATATTGC ATGTTCTCAA CAATTTAAAA ACAAATATAA AAACGTTAAT 
TTCTTGATGA ACAAGATAGA ATTCAACTTC TATTCCATAC CATTTATATT ACGTTTATCA 
ATAGAGAGTA AATTAAAATC CATGATAGGT TTTCAATCAT GCGATATAAC TAGAATGGTT 
AAAAACCGTA AAATAACGGA TACAAACAAA CAAGAAATCT CTGTTCCGAA AGTGTTGACC 
TTCCTGAATG ATAATGACCT TGTTGATACA CCTTGTTCTT TTGATGAAAT GAAAAGAATA 
TATTCATGGG CATGTAGATT TACTCATAAC GGCACAAAAG AATATGTATG GCTAAGATTA 
AAAGCCTTAC AAACACTTCA TAATTTATTT GACTATGAAT ACATTAAAAA TAACAATTTA 
AAAGATAAGC GTTCAAACTC CATTAATTAT TTAAAAGCAG GCGTATCAAT TAATACTCTT 
ATGGAAAAAA TAAACAATGA CAGTAATTTT AAGGGACATT ACAAACTATA CCTTTCTCAC 
GAGAGTTTTG ATGAGAACTT TGGTCTTTAT AACGACGAAG AGAAGAAATA TTACTAA
 
Protein sequence
MKNNLESLLE KIKKHPRYKK YDGRFPTLGT LTRYPEKNLP IIVEQGNRLI HPKESDLKNQ 
EDISFITEQF ISDIYQFLTE SHIYIEDKTI ASYGQSIITS NKLYHIACSQ QFKNKYKNVN 
FLMNKIEFNF YSIPFILRLS IESKLKSMIG FQSCDITRMV KNRKITDTNK QEISVPKVLT 
FLNDNDLVDT PCSFDEMKRI YSWACRFTHN GTKEYVWLRL KALQTLHNLF DYEYIKNNNL 
KDKRSNSINY LKAGVSINTL MEKINNDSNF KGHYKLYLSH ESFDENFGLY NDEEKKYY