Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1570 |
Symbol | |
ID | 8132511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1825359 |
End bp | 1826288 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644864859 |
Product | P2 GpU family protein |
Protein accession | YP_003017149 |
Protein GI | 253687959 |
COG category | [R] General function prediction only |
COG ID | [COG3499] Phage protein U |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.256457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGCGG TATTAGGAAA TATTGAATTT AAAGTGACCG CCTACTGGGA CGGCTTTAAT ACGTCATTTG GTGCAGATTA TGCCGAGCAT GGCCGTATTG AAGGTAAACC CGGTCTGCAG TTCATCGGTG CGAAGCTGGA CGAAATTACT ATTAGTCTGG TGTTTCACAA GCAGTACTGC ACGCCGGATG TGGAGTTGAA GCGGTTGACT GAGGCGATGC GGGCGCATCA GGCAATGGCG TTAGTCTTTG GCAATGGGGA TTATCGCGGC TGGTTTGTGA TTACGGCACT GACTTCGACC AGCGAACATA CCGACGCGAA GGGCAACGTA TTGGCCATGA ATGCCTCGTT AACGCTGCGA GAATACATTG GCGATCCAAA AAATCCGCTC AAGCCGCCTG CGATAGAGAC GCCTGTTCCT AATGTTAGCG CCATCACCAA AGCGGTCGAT AAAGTGAGCA ATTTTGCAGC TTCGCTACGC ACGGCTGTCA CGTATGCCAA GAAGGCGCAT TCTGCCGTTA AGGCGGTGAA AACCACCGTT CAGATTGTAA AACGGATGAA GAACAATCCC GAAACCGCGC TGCTGCAAAT TCCTGGGCTG CTAACGCAGG TCGGGAATGT ATTGACGCCG CTAAGTGAGG TGGAGCCGGC GTTTAAAAAA GCGGCAGAGG CTATTTCTGA TGCAGCGGTT CAGGCCGAGA AGATGACGCC TGAAATTACA GCGGTTAATA AAGCGGCGAA TGAAATGCTG AAGCAGGTCA AACAAGTTGC CACCTTGTTG CAGGGTGTCG ACAGCAAAAA CGTTATCGAG AAGCTGGAAG CCATCAGCAA ACATGTTGAT GCCGCGAGCG ACACATTTAA AGGCGCTGAA CCTGCGCTGA GCAAACTGAC GGCGGAAATC GTGAAGAGGG TTGAAGCATA TGCACCTTGA
|
Protein sequence | MFAVLGNIEF KVTAYWDGFN TSFGADYAEH GRIEGKPGLQ FIGAKLDEIT ISLVFHKQYC TPDVELKRLT EAMRAHQAMA LVFGNGDYRG WFVITALTST SEHTDAKGNV LAMNASLTLR EYIGDPKNPL KPPAIETPVP NVSAITKAVD KVSNFAASLR TAVTYAKKAH SAVKAVKTTV QIVKRMKNNP ETALLQIPGL LTQVGNVLTP LSEVEPAFKK AAEAISDAAV QAEKMTPEIT AVNKAANEML KQVKQVATLL QGVDSKNVIE KLEAISKHVD AASDTFKGAE PALSKLTAEI VKRVEAYAP
|
| |