| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1569 |
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| Symbol | |
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| ID | 8132510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1822882 |
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| End bp | 1825359 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864858 |
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| Product | phage tail tape measure protein, TP901 family |
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| Protein accession | YP_003017148 |
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| Protein GI | 253687958 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.258062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTAA ACGGTGTCAT GCTGGGCAGG GCGTTTGGCG CCACGCTGGA TGACACAAAA
AAATCGCTGC AGCCACTTAG CGATAAACTC AAACAAGCTG AGGAGTGGCA GCGTCTGTTT
AATCAGTCGC TGGAGCGCTT TGGAAATGTC AGTTTGCGCA GCACACAGGT GACATCCCGA
CTGAGCCAGT CACTAAGTAA ATTGGTAACC AATCAGGAAC GGCTGGAGAG TATCCAGTCA
CGTCAAGAAA CACTACGTAG CCGTCGGGGT GAACTCGCCG ATGACTTTAA GACTAAGCGT
GAGCAGTTTG GTTCTGTCAT GAAGCCGATT GTGGCGTCGG TCACACGCTA TGCGTCGTTT
GAGGCGCAGT TGCGTGGCAT CAGCGTTGCT CATGGGATAT CGAGTGGGCA AGAAAAGTTG
ATGGGGCAGA AACTGCGTCA ATCTTCTCAA CAGGTGAACC AAAAGCCAGA TGCATTGCTC
GGTAGTGCCG GGCAACTGCT TGCTTACGGC ATGTCACCGG ATCAGGCAAC GGATGTTGCG
GCAGTGTTGG GGAAAACGTC AACGGCCTCT GGCGCGGCGC TGTCCGATCT TACTGCACTT
TCGGCCACGT TGGATGACGT GTTTAACCTG AAAGGGGCGA AGGCGCTGGA GGAATCCTTC
TCTCGTATGT TGGCAGGCAC GAAACAAGGT TTCTCCATGG CGTCGATGAC GCAATACGCG
ACTGCGCTGG CTCCAGGGTT TACGGCAATG GGGGCGACGG GCAATCAGGC GTTGAGTCAG
TTGGTTTCCA GCCTGAGCGC GACAAAAGGC GCGGATACGG AGGCGAACAC GGCTGCCCGG
TTGGGAAGTT TCATGAATGC CGTGGGACGA ACCGACATTG CCGACAGCTA CTACAACGCG
GGCGTAGATT ATAACGCGTC GCTAAAAAGC TACATGAAAG GCGGCTATTC ACAGTACGAC
GCCGCAGTTC AGATTAGTAA CCGATTCATC GACAGCAAAG GCAGTCAATT CCAGCAACTG
TGGGATAAGG CCAGTAAAGC GGGCAACGTA GACGCACAGC AAAGTTTAAT GCAGCGCTAC
GGGCTGCAGG AGGTATTCCG TACGCCAGAA GCTGTGAATC ATGCGATGTC GATGAAGCAG
AACTGGCAGA GCTATCAAGC GAACCAACAG CGGATGAACA GTCCGGCAGC CATGCAAACG
CTGGATCTCG ACTTCGCCCG GCAGAATGAC ACATTGACTG GGCGCTGGAA TCAAATGACA
ACGTCAGTGA TGAATATTGC ACTCAATGTG GGGGAAGCGC TGACGCCAGT ATTGGTTTCC
TTGAGTGACA TACTGATTCC TATTCTGGAT CAACTGGTGA CCTGGACGGC GGCGAACCCT
GAACTGGTTC GTGGGATCGT GATGGCCGTC GCCGGTTTCT TCGCGTTCAG AATGGCATTG
AGCGGTGCGA AGCTGGGGAT TACCACACTG TTATCGCCTT TACTGAGCGT TTGGGATGGT
ATTTTGCAGG TTCAGCGTGG CTGGCAGTTG TTCAATGCAG GATTAAGAAT GACGGGGGTG
TTGCAAGGGG TAGGCGCGGC GTTGAACTGG CTGGTTGGCG GAGCCGGAAC ATTAGCACGT
ATGTTTGGCG GCGTATTACG CAGCGGCTTG ATGATGGCAG GTCGAGCAGT ATTGGTGCTG
GGGCGTTTGC TGCTGGCAAC ACCAATTGGT TGGATAATTA CCGCGATTGT GGGGGTAGTT
GCTTTGATTT ACTACTATTT TGACCCAATT GCTGCATTTT TCAAAGATCT CGGTTCAAGA
ATTGGCAATG CTTTCGATGC GGGTCTGGAA GCACTCAATA ATGCGGTATC CGGTGGTGTT
GTGGGTATTA CAGCTTTACT GCTCGATTGG TCGCCATACG GTGTAATCTA TTCAGTATTT
TCCGATGCTC TCAATGAGCT GGGTATTCAG CTTCCCAGCA GCCTAAGTGA GTTTGGTGGC
ATGCTTATTG ATGCATTGGT TAAGGGACTG ACTAGCGCTT TCCCCGAGTT AAAAAACGTC
CTGAAAACGA TCAATGAATT TATCCCTGAT AGCGTTAAAG ACTTTCTGGG TATCGGCTCG
AAAAAAGTAT CTGTAGAAGC CAGCGGCCAA TCTGTGGCTG CTGGTGTTAT GACCCCGCAA
GTTCTGCAAC CTACGTCGGT ATCTGCATTG TCGCTACAGC CGACACTGCC TGTTGAATCA
CCTAAGACGG AAGACACAAT GCCAACCCCG CAACAGCGGG TTGCAATGTC ATCATCTGTC
GGCGGAGCGA AAGGTAAGTT AGTCAGCGCA GCCCCTTCCG AACGTGTTCA GGTTGCTTTT
TCTCCCACCA TTTACCTCAA CGGCCAGAAG GCTGCGCCAA CGCCAGAAAT GACGAAGACG
CTGACCCTTA GCATGAATGA ACTGGAAAAT ATGTTGAACA AGCTGCTCGC TCAGCGTGAG
CGTAGGGGGT ACGCCTGA
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| Protein sequence | MLLNGVMLGR AFGATLDDTK KSLQPLSDKL KQAEEWQRLF NQSLERFGNV SLRSTQVTSR
LSQSLSKLVT NQERLESIQS RQETLRSRRG ELADDFKTKR EQFGSVMKPI VASVTRYASF
EAQLRGISVA HGISSGQEKL MGQKLRQSSQ QVNQKPDALL GSAGQLLAYG MSPDQATDVA
AVLGKTSTAS GAALSDLTAL SATLDDVFNL KGAKALEESF SRMLAGTKQG FSMASMTQYA
TALAPGFTAM GATGNQALSQ LVSSLSATKG ADTEANTAAR LGSFMNAVGR TDIADSYYNA
GVDYNASLKS YMKGGYSQYD AAVQISNRFI DSKGSQFQQL WDKASKAGNV DAQQSLMQRY
GLQEVFRTPE AVNHAMSMKQ NWQSYQANQQ RMNSPAAMQT LDLDFARQND TLTGRWNQMT
TSVMNIALNV GEALTPVLVS LSDILIPILD QLVTWTAANP ELVRGIVMAV AGFFAFRMAL
SGAKLGITTL LSPLLSVWDG ILQVQRGWQL FNAGLRMTGV LQGVGAALNW LVGGAGTLAR
MFGGVLRSGL MMAGRAVLVL GRLLLATPIG WIITAIVGVV ALIYYYFDPI AAFFKDLGSR
IGNAFDAGLE ALNNAVSGGV VGITALLLDW SPYGVIYSVF SDALNELGIQ LPSSLSEFGG
MLIDALVKGL TSAFPELKNV LKTINEFIPD SVKDFLGIGS KKVSVEASGQ SVAAGVMTPQ
VLQPTSVSAL SLQPTLPVES PKTEDTMPTP QQRVAMSSSV GGAKGKLVSA APSERVQVAF
SPTIYLNGQK AAPTPEMTKT LTLSMNELEN MLNKLLAQRE RRGYA
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