Gene PC1_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1538 
Symbol 
ID8132479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1792897 
End bp1793253 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content52% 
IMG OID644864827 
ProductFMN-binding domain protein 
Protein accessionYP_003017117 
Protein GI253687927 
COG category[S] Function unknown 
COG ID[COG3976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.628376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT CTATTTCGGC AGCGCTGGCT ACATTAGTGA TGGCTTTTTC TCTGTCTGTT 
CACGGCAACG ATGTGGTGCA CTATAAAGAC GGCACCTACA TCGGTAAAGC GCAGGGCAAG
GCGGCAGAGG TTGAGGTAAC GGTCAGCATT AAAGAAGGGA AGATTGCCAA CGCGGAAGTG
CTGAAGCATG GCGATACTGA AGCGATGATG TTGAGTGCGA CGGATCAAAT CGTGCCGGAG
CTCATTGAGA AGCAGGATAT TAACAAGGTG GATGCGGTAA CGGGGGCGAC GTTATCGAGC
CAGGGCGTGA TTAATGCGGT GAAACAGGCG CTGGAACAGG CCAAAGTCAC GCCGTGA
 
Protein sequence
MKKSISAALA TLVMAFSLSV HGNDVVHYKD GTYIGKAQGK AAEVEVTVSI KEGKIANAEV 
LKHGDTEAMM LSATDQIVPE LIEKQDINKV DAVTGATLSS QGVINAVKQA LEQAKVTP