Gene PC1_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1501 
Symbol 
ID8132442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1752363 
End bp1753781 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content34% 
IMG OID644864791 
Producthypothetical protein 
Protein accessionYP_003017081 
Protein GI253687891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACTCA ATGACGAGCA AAAAAGAACA CAGATCTCGA GTTCCCATCG TTTAATTAAT 
TTAACAAGAA AGCTAAGACA CAATTTAGAT GTGGATGGCG GCTATGGGGA GAATCATGAA 
ATAATTGATC CTTATTTTTT CATTCACGAT ATATTAGCCG ATCTTGAGAA CAAACTAAAC 
ATTAGTATAT CGAAAAGGCA ATCGGCGTTA CTAAAAAGAA TAAAAACCAA AAAAGATCAA 
TATAGCAGCA GTCCACTCAC CCCTATTGAA TACGCAACAG AAGCTATCTT TGATAATTAT 
TTTTTCAAAA ATAATGATGA CTATGTCAAT AGATTAGAAA CATCGACGTT AATCAAAGAA 
AGTATCGATA GATATGGAAA AATAATGCTC GTCATGCCAG TTCTTTCACG GAAGCCATTT 
TCTCCGATAA AAAACAAAGG GATTTTTCCT GATTTGGGTG AAATAAACAC ATTGCTGCGA 
TGCGCAAAAT TAGCAAAACT AATCAGTAAT ATTTCTGGTT TCCCCTGTGA GTTTTTGATA 
TTAGCTGATG GTCATAAATA TAATCGAGCC TGTAAAACCC CTCATGAGGT AGTAAGTTTA 
TATCAACAGT CATTGAGATA CTGGGTTAAC TATTTACATA TAGATGAATA TGTGAAGATA 
ACTGACTACG AAGAGTGGAT TGTTAATGCC GATGAAGTAA ATTGGCAATT AAACAGAGAG 
TGTTTATACA ACACCATATA TCAAGACATC TCAAAAAAGT ACGATAAAGC ATTTTGTTTC 
AATGATTTAG ATACGACCTT TAATACAATG GAACTCGATG AATTAGGAAA ACAATTAAAA 
TATACATACT GGTCGATAAT GACATCGGTA AATTACACAT CACTTTATCC AAAATGGTCA 
CGAGGCATGC AGATTTATAC GAAGGAAAAT CAAAACTTCT ATTTATCTTT CATTAGTGCT 
TCTCATTATT CACTAGAGAG AATAAAAAAA TCGCATTTGT TTGTTCCTGA TTTGGTCGGT 
GATATGTCGC ACTGCGCAGT TGACATAATT ATGAATATGA GAAATGAAAA CTGGGAAGCA 
GCAAAAAGAT ATGTATCTAT TTCTTTGGCT GATAGGCAGC TTAATACTAT ATTTCGAAAA 
ATCCCCACGG CACTAAAACT AACGATCCAT GCTAAAAAAG GGGAATTTAA TTTTATCGCT 
ACAAATCAGA AGTCTTACTC GATGACCGCT CAACACACGG TTGCAGGTAT CAAGAGACAG 
AATGATAGTA TTACTGTCGA TTATCAATAC AGGTTAACTC GTGAGGCAGA AAAACAAACA 
GGTGTGTATA TCCATACACC AAACCATCGT CACAGTGAAT TTGATCCATT ATATGAAATG 
AGTTTGATTA AGCAACCTAT TTATTATATT ACAAAGTAA
 
Protein sequence
MLLNDEQKRT QISSSHRLIN LTRKLRHNLD VDGGYGENHE IIDPYFFIHD ILADLENKLN 
ISISKRQSAL LKRIKTKKDQ YSSSPLTPIE YATEAIFDNY FFKNNDDYVN RLETSTLIKE 
SIDRYGKIML VMPVLSRKPF SPIKNKGIFP DLGEINTLLR CAKLAKLISN ISGFPCEFLI 
LADGHKYNRA CKTPHEVVSL YQQSLRYWVN YLHIDEYVKI TDYEEWIVNA DEVNWQLNRE 
CLYNTIYQDI SKKYDKAFCF NDLDTTFNTM ELDELGKQLK YTYWSIMTSV NYTSLYPKWS 
RGMQIYTKEN QNFYLSFISA SHYSLERIKK SHLFVPDLVG DMSHCAVDII MNMRNENWEA 
AKRYVSISLA DRQLNTIFRK IPTALKLTIH AKKGEFNFIA TNQKSYSMTA QHTVAGIKRQ 
NDSITVDYQY RLTREAEKQT GVYIHTPNHR HSEFDPLYEM SLIKQPIYYI TK