| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1398 |
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| Symbol | |
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| ID | 8132337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1633839 |
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| End bp | 1634705 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864688 |
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| Product | ABC transporter related |
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| Protein accession | YP_003016980 |
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| Protein GI | 253687790 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.225805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACACC ACTCCCACGA TACCGTCGCC CAGCCGCTGT TGCAGGTTGA TGGCGTCGGA
CTGGAATACC GAACCCGTCG CAGTTTGGTT CGCGCCACCC ATGATGTGAG TTTCGACGTC
TTTCCCGCCG AGCGCTTTGT ACTCTTAGGG CCTTCAGGCT GTGGTAAATC CAGCCTGCTC
AAATCTATCG GCGGTTTTTT GTCCCCGGTA GACGGTGAAA TCCGCCTTGA GGGTCAGCCA
GTCACACGTC CGGGCCCGGA TCGCATCATG GTCTTTCAGG AATTTGATCA GCTGCCGCCG
TGGAAAACTG TGCTGGAAAA TACGCTATTT CCGCTGGTTG CCAGCCGTCA GGCAACACGA
GCCGAAGCCG AGGAACGCGC GCGTTATTTT CTCGATAAGG TCGGGCTGGC GAAATTTGCC
GATGCCTATC CGCATACGTT ATCCGGTGGA ATGAAGCAAC GCGTCGCCAT CGCGCGGGCG
CTGACCATGC AGCCGAAAGT GCTGCTCATG GATGAGCCAT TCGCCGCGCT GGATGCGCTG
ACACGACGCA AAATGCAGGA AGAACTGCTG GCGCTGTGGG AAGAGGTGCG ATTCACGCTG
CTGTTTGTCA CCCATTCGAT TGAAGAAGCG CTGATCGTCG GCAGCCGGGT TTTGCTGCTC
TCCCCCCATC CGGGTCGTGT GCGAGCGGAA ATCAACTGCC ATCAGTTCGC GCTGAGCGAC
CAGGGCAGTG AGGCTTTTCA AACCACCGCA CAGCGTATTC ACCATCTTCT TTTTCCAACT
GATACTGACG TACCTTCACC CGTCACCTCT ACGCAAGGTA AATCTTATGA GCATACAGCC
CCCCGTGCGG CCCGAGTATC AGCGTGA
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| Protein sequence | MTHHSHDTVA QPLLQVDGVG LEYRTRRSLV RATHDVSFDV FPAERFVLLG PSGCGKSSLL
KSIGGFLSPV DGEIRLEGQP VTRPGPDRIM VFQEFDQLPP WKTVLENTLF PLVASRQATR
AEAEERARYF LDKVGLAKFA DAYPHTLSGG MKQRVAIARA LTMQPKVLLM DEPFAALDAL
TRRKMQEELL ALWEEVRFTL LFVTHSIEEA LIVGSRVLLL SPHPGRVRAE INCHQFALSD
QGSEAFQTTA QRIHHLLFPT DTDVPSPVTS TQGKSYEHTA PRAARVSA
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