| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1365 |
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| Symbol | |
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| ID | 8132304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1591005 |
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| End bp | 1593083 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864655 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003016947 |
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| Protein GI | 253687757 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACACA CACTCACTCT TTCACCGACG CCTAAGCGGG ATCCTATATT CCTGTGGCTG
GCGCTGATTG CGGCAACATT CTTGCTGCTG CCAGCGTGGA GCCTGGATTA CGGCCTGCTG
GATGCTTCAC GCGATGAACT GCTGGCCGCT TACAGCTGGT CGAACCTGAA TATCAGCCTG
CTTTGGTTCC TGCTCCCGTT GGGACTGCTG GCGCGTCCGC TGTTTACGCC CGGCCGGGAA
CAACGCGGTC GCCACCGTTT TGATGCGGCG TATGCCTTGT TCTGCGCGCT TTTCGTAGTC
ATCAGTGCCA CGCTCGAAGG GCGCGGAATG GGTTATGGCA CGATCGCCCT GTTTGTCGCA
CTGAGTGCGA TTATTACGCT GGCGCTCTCT AGGCTTGACT GGCTGGGTGG CGATCGCTTC
GTCATCGGCT CGCTCATCAG CATCATCGCG CTGATTGGCG TGTTTATTCT TTACCCCAGC
ATCGCCATCT TTATTCCCAT GTTCACCAAC GACAGCGGTG AATTCGCGCC GCTCGCGTTT
ATGCAGATTC TGGGTCAGAC GCACATTTTA CGCGTGATCT GGAACTCATT CCTGCTGTCG
GTTGCCGTTG GTATCGGCTG TACCTTCTTC GGTATGGTGC TGGCCATTTA CACTTCGCGC
ATCGCCCGTC GCTCCGCGAT TATCGGCCGC ATTTTCTCCA TTCTACCTAT CGTTACCCCG
CCGTTTGTCG TCGGGTTAGG CGTAACGCTG ATGATGGGTC GCTCCGGTTA TGTCACCGAG
CTGATGGTAG CCTGGTTCGG CCTAACGAAC ACCAACTGGC TGTATGGTTT TACCGGTATC
TGGCTGGCGC AGGTGCTCGC CTTTACGCCG ATGTCGTTCA TGATTCTGGA AGGCGCGATG
AAGACGATTC ATCCGTCGCT GGAAGAGGCG TCATACACGC TGCGTGCCAA CCGCTATCAA
ACCTTTCAAC GGGTTTTCCT GCCCCTGTTG AAACCCGCGC TGGCTAACTC GTTCCTGATC
GTAATCGTCC AGTCGCTGGC CGATTTCAGT AACCCGCTGG TGCTGGGCGG CAACTTCGAC
GTACTCGCCA CCCAGATTTA CTTCTACATC ACCGGTGCAC AGCTGGATTA TCAGTCAGCC
AGTACGCTCG GCGTTGTCCT GCTGCTGTTC TCACTGGCGG TGTTCTGCGT GCAATATCTG
TGGATCGGCA AACGCTCCTA CGTCACGATT TCCGGTAAAT CCTACCGTGG CGATGTGCAA
CCGCTGCCCG TTTCGCTGGT GTGGATCGTC AGCATCCTGC TCTATGTCTG GATTGCCTTT
AACGTCCTGC TGTACGGCAG CATTTTCTAC GGCAGCTTTA CGGTTAACTG GGGCGTGGAT
TACACCCTGA CGTTGGCAAA CTTCAGCAAG TTGTTCGGAC AAGGCTTTAG CGACGGCGCC
TGGCCTTCCC TGCTGGATAC GCTGCTGTTC GCGGGCATCG CGGCACCGAT TACGGCACTG
TTTGGACTGC TTATCGCCTA CATCGTGGTA CGCCAGCAGT TCTACGGTAA GAAAGCCATC
GAGTTCACCA CCATGCTGTG CTTTGCAGTG CCGGGCACCG TTGCCGGTGT GTCTTATATT
CTGGCCTTTA ACAGCGCGCC GGTTTACCTA ACGGGAACGG CAGTGATCGT CATCATGTCG
ATGGTGATGC GTAACGTACC GGTTGGTATC CGTGCCGGTA TCGCCGGACT GGGGCAGTTG
GATAAATCGC TGGATGAGGC GTCGCTCAGT CTGCGAGCGG GTTCGATGCG TACGGTGTTC
TATATTCTGC TCCCGCTGTT ACGTCCGGCC ATTTTGTCCG CGCTGATTTA CAGCTTCGTG
CGCGCTATTA CCACCGTCAG CGCCATTATC TTCCTGGTTA CGCCAGATAC CCGCGTCGCC
ACGTCTTACA TCCTTAACCG CGTGGAAGAC GGCGAATACG GTATGGCGAT TGCCTACGGT
TCCATCCTGA TTGTGGTCAT GCTGGCCATT ATTTTCCTGT TCGATTATCT GGTCGGTGAA
GCGCGGGTTT CCCGCTCAAA AGCCAAGAAT AGTGACTAA
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| Protein sequence | MSHTLTLSPT PKRDPIFLWL ALIAATFLLL PAWSLDYGLL DASRDELLAA YSWSNLNISL
LWFLLPLGLL ARPLFTPGRE QRGRHRFDAA YALFCALFVV ISATLEGRGM GYGTIALFVA
LSAIITLALS RLDWLGGDRF VIGSLISIIA LIGVFILYPS IAIFIPMFTN DSGEFAPLAF
MQILGQTHIL RVIWNSFLLS VAVGIGCTFF GMVLAIYTSR IARRSAIIGR IFSILPIVTP
PFVVGLGVTL MMGRSGYVTE LMVAWFGLTN TNWLYGFTGI WLAQVLAFTP MSFMILEGAM
KTIHPSLEEA SYTLRANRYQ TFQRVFLPLL KPALANSFLI VIVQSLADFS NPLVLGGNFD
VLATQIYFYI TGAQLDYQSA STLGVVLLLF SLAVFCVQYL WIGKRSYVTI SGKSYRGDVQ
PLPVSLVWIV SILLYVWIAF NVLLYGSIFY GSFTVNWGVD YTLTLANFSK LFGQGFSDGA
WPSLLDTLLF AGIAAPITAL FGLLIAYIVV RQQFYGKKAI EFTTMLCFAV PGTVAGVSYI
LAFNSAPVYL TGTAVIVIMS MVMRNVPVGI RAGIAGLGQL DKSLDEASLS LRAGSMRTVF
YILLPLLRPA ILSALIYSFV RAITTVSAII FLVTPDTRVA TSYILNRVED GEYGMAIAYG
SILIVVMLAI IFLFDYLVGE ARVSRSKAKN SD
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