Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1331 |
Symbol | |
ID | 8132269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1549907 |
End bp | 1551010 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644864621 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003016914 |
Protein GI | 253687724 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.294079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAC TAAAACAGGT GGTCGCATTT ACGGCGCTGA TGGCGACGGC AGCGACCAGC TATGCGGCAG TAGAAGCCGA TAAGCGCCCG ATTAACGAGC TTTATCAAAA CGCGTTACGG GAAGGCGGTA TTGTGACCGT CTACGCGGGC GGTGACACAC CGGGTCAGCA GGATGGCATC AAACAGGCGT TTGAGAAACG CTTTCCGGGC ATGAAACTCA ACGTCATTGT GGATTACAGT AAATTCCACG ATGCTCGTAT TGATAACCAG CTGGCAACGA ATACGCTGGT GCCGGATGTC GTACAGCTTC AGACCTTGCA GGATTACCCG CGCTGGAAAA AAGAAGGTGT GCTGCTGAAC TATAAACCTA TCGGCTGGGA CAAAGTGTAC CCCGCGTTTA AAGACAAAGA CGGCAGTTGG ACCGGCGTAT TTGTCGATGC GTTCAGCAAC GTGGTCAATA CCAAACTGAT TGCCGAAAAT GCCTGGCCAA CAGAAGCGAA TGACTATTTA CGTCCCGATC TGAAAGGCAG CATTGTCTTA ACCTATCCGA ACGATGACGA CGCCGTGCTG TTCTGGTTTA AGCAGGTCGT GGATAAATAC GGCTGGGAGT ATGTCGCTAA ATTCAAAGAA CAGAACCCGG TTTACGTTCG TGGCACACAG GCTCCTGCAG ACGATGTTGA AAGCGGTAAG TCAGCAGCAA CATTCTCAAC CGACGGTGCA CTGGCTCCCG ATCAAAACGC GAATTCGCGC TTCGTTCTGC CTAAAAGCGA TCCGTTTGTT TCCTGGGCCC AACGTGCAGC CATTTTCAAA CAGGCTAAAC ACCCGGAAAG CGCTAAGCTG TATCTGAGCT GGCTGCTGGA TAAAGAAACG CAGAGCAATG TCTGGTATAT GTGGTCGGTG CGTACTGACG TGGCACCACC CGCTGGCTAT AAACCTATCT GGGAATATAA GAACACCAGC CCGCAGGCTT TTGCTGACTT CATGAGCGAT CGTGCGGCGG TAGAATCGTT CCGTGCTCAG ATCGGTCTGT ATCTTGGTGA AGTGAAAGGT GAACCGTCTC CGGGTAACCT GGGGGTGCAT CCAAAAGAAG CATTACCGCA CTAA
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Protein sequence | MFKLKQVVAF TALMATAATS YAAVEADKRP INELYQNALR EGGIVTVYAG GDTPGQQDGI KQAFEKRFPG MKLNVIVDYS KFHDARIDNQ LATNTLVPDV VQLQTLQDYP RWKKEGVLLN YKPIGWDKVY PAFKDKDGSW TGVFVDAFSN VVNTKLIAEN AWPTEANDYL RPDLKGSIVL TYPNDDDAVL FWFKQVVDKY GWEYVAKFKE QNPVYVRGTQ APADDVESGK SAATFSTDGA LAPDQNANSR FVLPKSDPFV SWAQRAAIFK QAKHPESAKL YLSWLLDKET QSNVWYMWSV RTDVAPPAGY KPIWEYKNTS PQAFADFMSD RAAVESFRAQ IGLYLGEVKG EPSPGNLGVH PKEALPH
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