Gene PC1_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1325 
Symbol 
ID8132263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1543050 
End bp1543607 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content50% 
IMG OID644864615 
Productchorismate mutase 
Protein accessionYP_003016908 
Protein GI253687718 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01806] chorismate mutase, putative 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.17523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTGC CTATTTCCGC TGTTATCTCG TTAGTGATGA GTTCTGCCTG GTGTCTCCCT 
CTGCATGCGG CCGTGCAGGA TAGTTCTCTT GGAATCTATC AACTGATTCA GGAGAGGATG
GTGCTGATGA AGGATGTCGC GGGGTATAAG GCCCGTCAAC ACCTGCCGGT TGAGGATCTG
AAGCAAGAGG AACGTATTTT GAGTAAGGCG CGGGAGCAAT CCGCTGCCGT AGGCTTATCC
CCCCAAAGTA CGCAGCTGTT TTTTACTTCA TTAATGAATG CCAGCAAAGC CATTCAGTAT
CGCTACATGG CGGACTGGCT TGCGACACCG GAGAACGACT GGACGCCGCT TTCGCTGAAT
GACACGGTCA GGCCTACGTT ACTCACGATT GATGATCAGC TTCTGGTTAG CATTAAGCGT
TACCTCGCGA ATGGCGGACA TTTTACGCCT CAGCAAGAGG CTGCATTTCT TTCTTCTATT
AATGTTGAGC ATCTGTCACA GAACGACAAA CGCCAGATTT ACGCGGCATT GAGTCACATT
GAACCAGACG GCAAATAG
 
Protein sequence
MNVPISAVIS LVMSSAWCLP LHAAVQDSSL GIYQLIQERM VLMKDVAGYK ARQHLPVEDL 
KQEERILSKA REQSAAVGLS PQSTQLFFTS LMNASKAIQY RYMADWLATP ENDWTPLSLN
DTVRPTLLTI DDQLLVSIKR YLANGGHFTP QQEAAFLSSI NVEHLSQNDK RQIYAALSHI
EPDGK