| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1304 |
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| Symbol | |
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| ID | 8132242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1520847 |
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| End bp | 1521959 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644864594 |
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| Product | Glutamine--scyllo-inositol transaminase |
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| Protein accession | YP_003016887 |
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| Protein GI | 253687697 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.298475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCAAGT TTTTAGAATT AAAAGATATA AATAATAAAT ATCATAGTGA GCTTATGGAG
GCTGCATTAC GAGTTGTCTC CTCGGGTTGG TATATAGCAG GAAAAGAACT TTCTGATTTC
GAAGACGTGT TTGCCAAATT TTGTGGTACA AAATATGCAA TCGGCGTTTC AAATGGATTA
GATGCGCTTA TTTTAACATT AAGAGGATGG AAAGAATTAG GGAAACTACA AGACGGTGAT
GAAGTTATTG TGCAAGCAAA TACCTATATC GCTTCCATCT TAGCTATAAC TGAGAATAAT
CTAAAACCGG TTTTGGTTGA ACCTGATCCT ACATCATATA ATTTATCTTC TGATGCTATA
AAGTCGGCTA TAACACCAAA AACAAAGGCT ATTTTACCTG TTCATCTATA TGGGCGAATT
AACCCAATGG ATGAGATTAT TGCTATTGCA AAAGAGCATC ATCTTTTAGT TCTCGAAGAC
TGTGCTCAAG CACACGGCGC TGTATTTAGT GGAAAAAAAG CGGGAGCATG GGGTACTGCA
TCTGGATTTA GCTTTTATCC TGGAAAAAAT CTTGGTGCAT TAGGTGATGC GGGAGCGATA
ACGACTAACG ACCATGAATT GGCTAAAATG CTGAAGGCTT TGCGTAACTA TGGTTCGCAT
AAAAAATATG AGCATGCTTA TCAAGGCGTT AACAATCGGC TTGACGAAAT GCAGGCCGCT
TTTCTTTCTG TGAAATTGAA GTATTTGGAA CAGGATAACA CAAGACGTCA AGCAATCGCA
GAGACTTATT GTACCCAAAT AAAGAATAGT TTAATTTCAT TGCCACAAAT TCCTCATGAC
TATTTAGAAC ATGTCTGGCA TTTGTTTGTT ATCAGATGTG ACAGTAGAGA CAGGCTGCAA
GCGTATCTTG CTGAGCGAGG AATTCAAACA TTAATTCACT ACCCAACTCC GCCACATCTT
CAACAGGCTT ATGAAGGGTT AGGCTACACT GAAGGTAGCT TCCCTATCAC TGAGCAGATA
CACAAGCAGG TACTCAGTTT GCCCATAGGT CCCACGCTAT CAGATGATGA ATTACAGGCG
GTGATAACAG CAATCAACGA GTACCAAGGA TGA
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| Protein sequence | MIKFLELKDI NNKYHSELME AALRVVSSGW YIAGKELSDF EDVFAKFCGT KYAIGVSNGL
DALILTLRGW KELGKLQDGD EVIVQANTYI ASILAITENN LKPVLVEPDP TSYNLSSDAI
KSAITPKTKA ILPVHLYGRI NPMDEIIAIA KEHHLLVLED CAQAHGAVFS GKKAGAWGTA
SGFSFYPGKN LGALGDAGAI TTNDHELAKM LKALRNYGSH KKYEHAYQGV NNRLDEMQAA
FLSVKLKYLE QDNTRRQAIA ETYCTQIKNS LISLPQIPHD YLEHVWHLFV IRCDSRDRLQ
AYLAERGIQT LIHYPTPPHL QQAYEGLGYT EGSFPITEQI HKQVLSLPIG PTLSDDELQA
VITAINEYQG
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