Gene PC1_1290 details

Gene Information

• Locus tag: PC1_1290
• Symbol: dcd
• ID: 8132228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1505438
• End bp: 1506019
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644864580
• Product: deoxycytidine triphosphate deaminase
• Protein accession: YP_003016873
• Protein GI: 253687683
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0717] Deoxycytidine deaminase
• TIGRFAM ID: [TIGR02274] deoxycytidine triphosphate deaminase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACTGT GTGACCGTGA CATTGAAGCC TGGCTGGATG ATGGCCGACT GGTGATTACG 
CCCCGTCCGC CGACTGAGAG AATCTCTGGC GCGACGGTTG ATGTTCGCCT GGGAAATCAG 
TTTCGCGTCT TCCGCGGACA CACTGCGCCT TTCATTGATT TAAGCGGTCC GAAGGATGAG 
GTCAGCGCGG CGCTCGATCG CGTCATGAGT GATGAAATCA ATTTACCGGA AGGCGAAGCG 
TTCTTCCTGC ACCCAGGAGA GCTAGCGCTG GCGGTGACGT TGGAATCAGT GACGCTGCCG 
GATGATTTGG TCGGCTGGCT GGATGGTCGT TCTTCACTGG CACGTCTGGG ATTGATGGTT 
CACGTCACCG CGCACCGTAT TGATCCAGGT TGGCAAGGAA GAATTGTGCT GGAGTTCTAT 
AATTCAGGTA AGTTGCCGCT TGCGTTACGT CCCGGCATGA TGATTGGCGC TCTGAGTTTT 
GAACCACTTT CTGGGCCGGC GGCTCGTCCA TACAACCGCC GTCAGGATGC CAAGTATAAA 
GATCAACAGG GTGCGGTAGC GAGCCGGATC GATAAAGACT GA 

 

Protein sequence

MRLCDRDIEA WLDDGRLVIT PRPPTERISG ATVDVRLGNQ FRVFRGHTAP FIDLSGPKDE 
VSAALDRVMS DEINLPEGEA FFLHPGELAL AVTLESVTLP DDLVGWLDGR SSLARLGLMV 
HVTAHRIDPG WQGRIVLEFY NSGKLPLALR PGMMIGALSF EPLSGPAARP YNRRQDAKYK 
DQQGAVASRI DKD