| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1222 |
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| Symbol | |
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| ID | 8132157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1428675 |
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| End bp | 1429367 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864510 |
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| Product | ABC transporter related |
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| Protein accession | YP_003016806 |
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| Protein GI | 253687616 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.678182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACGG CTGAACTCAC TACGCCTGCG GCGATTGCGA TCGACAAACT GACCCACGCT
TTTGCTGGGA AAACGGTGCT CGATGCTATC AGCCTCAATG TGCCGAAAGG CACCATTCTG
GCCTTGCTGG GACCTTCCGG CTGCGGCAAA AGCACGTTGC TAAAATTGCT GGCCGGTCTG
TTACAGCCGG ACGCGGGCAC CATTCATTTT GGCGATCGTC AGGTTGCCGG CCATCAACTA
TGCCTGCCAC CAGAGCAGCG CAATCTTGGC ATGGTCTTTC AGGACTATGC GCTTTGGCCG
CATATGACCG TTGCACAAAA TGTCGGGTTC CCGCTGATGA TGAGGAAGGT TCCACGCGAT
ATCTGCCGCC AACGCGTTGA CGTCACGCTA GCGCGCGTCG GTCTGGCTGA TTTTGGCGAT
CGCAAACCGG CCGATTTATC CGGCGGCCAG CAACAGCGAG TCGCACTGGC GCGCGCCATT
ATCGCGGAGC CGAACATCCT GCTATTCGAT GAACCGCTAT CCAATCTCGA CCGGGATCTA
CGTGAATCGC TTTGTCAGGA GATGGCATCG CTCTTACGCC ATCTTGGTAC CACCGCCGTG
TATGTCACCC ACGACCGAGG CGAAGCCAAC ATACTGGCGC ACCGTATTGT TCACATGTCG
CAAGGCCACA TTACTGATAT CACCACACTT TAA
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| Protein sequence | MTTAELTTPA AIAIDKLTHA FAGKTVLDAI SLNVPKGTIL ALLGPSGCGK STLLKLLAGL
LQPDAGTIHF GDRQVAGHQL CLPPEQRNLG MVFQDYALWP HMTVAQNVGF PLMMRKVPRD
ICRQRVDVTL ARVGLADFGD RKPADLSGGQ QQRVALARAI IAEPNILLFD EPLSNLDRDL
RESLCQEMAS LLRHLGTTAV YVTHDRGEAN ILAHRIVHMS QGHITDITTL
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