Gene PC1_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1202 
SymbolnagA 
ID8132137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1402556 
End bp1403701 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content54% 
IMG OID644864490 
ProductN-acetylglucosamine-6-phosphate deacetylase 
Protein accessionYP_003016786 
Protein GI253687596 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1820] N-acetylglucosamine-6-phosphate deacetylase 
TIGRFAM ID[TIGR00221] N-acetylglucosamine-6-phosphate deacetylase 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.166295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGCGT TAACCCACAG CCGGATTTTT ACCGGCCATC AGATTCTGGA TAATCACGCC 
GTCGTGATTG CCGATGGGCT GATCGAGCGG GTCTGCCCAC TTGCCGAGCT CCCTGTCGGC 
ATTGAACAAC ACGACCTGGG CGGCGCGTTT CTCGCTCCGG GGTTTATCGA TCTCCAGTTG 
AACGGATGCG GCGGCGTGCA GTTCAACGAC TCGCTGGACA CAATTTCCGT CAAAACGCTG 
GAGATCATGC AGCAGGCAAA CCAGCGTTCA GGCTGCACTA GTTTCTTACC CACGCTGATT 
ACCTCCAGCG ATGCGTTCAT GAAACACAGC ATCAACGTGA TGAAAGACTG GCTCGCGCAG 
AATAAGCATC AGGCGCTTGG ACTGCATCTC GAAGGCCCGT GGCTGAACGT GATAAAGAAA 
GGCACGCATG ACCCCGCGTT TATCCGCAAA CCAACGCAAG AATTGGTCGA CTTTCTGTGT 
GCCAACGCGG ATGCCATTAC AAAAATCACA CTGGCGCCGG AAGAAGTCGA TCCGTCGGTT 
ATTCGCCAGC TAACGGCCGC AAGTATTATC GTCTCCGCGG GGCATTCTAA TGCCACCTGG 
GAACAGGCAA AACAGGGCTT TGCTGCCGGT ATTCGTTTCG CTACCCACCT GTTCAACGCC 
ATGCCGTACC TGACCGGTCG TGAACCCGGA CTGGTTGGCG CGATTTACGA TGCCCCGGAA 
GTCTATTGCG GTATTATCGC GGATGGACGG CACGTCGACT GGGCTAATAT CCGCAACAGT 
AAACGTATCA AGGGCGATAA ACTGGTGCTG GTTACCGACG CAACGGCACC AGCAGGCGCA 
GATATTGACC AATTCATTTT TGCTGGTAAA ACCATATACT ACCGCGATGG CATTTGTGTC 
GATGAGCACG GTACCCTGAG CGGCTCTGCG CTGACCATGA TTGAGGCTGT ACGTAATAGC 
GTCGAACATG CGGGTATCGC GTTGGATGAA GCTATTAGAA TGGCGACGCT CTATCCCGCT 
CGCGCCATTG GCGTCGATAA GCAGTTAGGC AGTATTGAAA GCGGTAAAGT GGCAAACCTG 
ACCGCCTTTG ACCGTGATTA TCAGATTCTC AAGACGTTTG TTAACGGTAA TCCTGTTTGG 
GGATAA
 
Protein sequence
MYALTHSRIF TGHQILDNHA VVIADGLIER VCPLAELPVG IEQHDLGGAF LAPGFIDLQL 
NGCGGVQFND SLDTISVKTL EIMQQANQRS GCTSFLPTLI TSSDAFMKHS INVMKDWLAQ 
NKHQALGLHL EGPWLNVIKK GTHDPAFIRK PTQELVDFLC ANADAITKIT LAPEEVDPSV 
IRQLTAASII VSAGHSNATW EQAKQGFAAG IRFATHLFNA MPYLTGREPG LVGAIYDAPE 
VYCGIIADGR HVDWANIRNS KRIKGDKLVL VTDATAPAGA DIDQFIFAGK TIYYRDGICV 
DEHGTLSGSA LTMIEAVRNS VEHAGIALDE AIRMATLYPA RAIGVDKQLG SIESGKVANL 
TAFDRDYQIL KTFVNGNPVW G