| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1186 |
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| Symbol | |
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| ID | 8132115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1382577 |
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| End bp | 1383131 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864468 |
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| Product | LPS-assembly lipoprotein RlpB |
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| Protein accession | YP_003016770 |
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| Protein GI | 253687580 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2980] Rare lipoprotein B |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.250685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCGACATC GTCTATTCAC GCTGTTGCTG GGGCTAGCGG TGTTAATCAC CGCTGGCTGC
GGTTTTCACC TGCGCGGCAC GACACAAGTG CCTGCGCAGT TACAAACGCT GGTGCTTGAC
AGCAGTGACC CTTATGGCCC GCTCACGCGT GCGGTACGCG AGCAGCTCCG TCTCAGCGAT
GTGAAAATCG TTGACGATGC GACACGCCAG GATATCCCGT CTCTGCGGGT ACTGGGCTCA
AGCGAAACGC GCGATACTGT CTCTATTTTT CAGGATGGTA AAACGGCGGA GTACCAGATG
GTGCTGACAT TGCAGGCGCA GGTGCTGATG CCGGGTGAAG ATATTTATCC GCTCAGCGTG
ACCGTGTTCC GCACGTTCTT TGATAACCCG CTGGCGGCAC TGGCGAAAGA TGCCGAACAG
GACATCGTTC GTCAGGAAAT GCGTGAGCAG GCTGCCCAGC AGTTGGTGCG TAAATTGCTG
ACCGTCAACG GTAGTCAGGA AGTCAAAAAT CGGCAGCAGT CCACCCATTC CACTGCTGCC
GCCACGCGTT CATGA
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| Protein sequence | MRHRLFTLLL GLAVLITAGC GFHLRGTTQV PAQLQTLVLD SSDPYGPLTR AVREQLRLSD
VKIVDDATRQ DIPSLRVLGS SETRDTVSIF QDGKTAEYQM VLTLQAQVLM PGEDIYPLSV
TVFRTFFDNP LAALAKDAEQ DIVRQEMREQ AAQQLVRKLL TVNGSQEVKN RQQSTHSTAA
ATRS
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