| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1168 |
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| Symbol | |
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| ID | 8132097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1366911 |
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| End bp | 1367585 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864450 |
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| Product | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin |
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| Protein accession | YP_003016752 |
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| Protein GI | 253687562 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0190476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGACGT CAGCTATGTT AACCGGTAAA AGCGACCAGC ATCTGGTTGC TTTAGACGGT
CGCCATCGCC TTCAGCCAGA AGCGGTAACC GCGTTTCTGG CGCTACAGCT GGCAGCAAAG
ACGGCGGGAT TTAACCTGCA ACCAGCCAGT ACGTTCCGTG ATTTCGAGCG CCAGCGTCAG
ATCTGGAATG GCAAGTTCCG CGGCGAGCGT CCCGTCATGG ATGCCAACAG CCAGCCGCTG
GATGTGTCGT CTTTGGACGA AGGCGATCGC TGTGAAGCGA TTCTACGCTG GTCAGCCATG
CCCGGCTCCA GCCGTCACCA TTGGGGCAGC GATCTCGATA TCTACGATCC CGATTTATTA
CCCGCAGGCA GCTCGCTCCA GTTGGAGCCG TGGGAATATG AAGAAGGCGG TTATTTTGCC
GCATTGAACG CGTGGCTGAG CGCGCACATG CATGAATACG GTTTTTATCG ACCTTATGCG
CACGATCTCG GCGGTGTCGC AGTCGAACCC TGGCATATCA GCTATTATCC ATTAGCACAG
TATGCGGAAG AACAGCTTAC ACCCGATCTC ATCCTTGCCG CCTGGCAAGA TGAAGATATT
GCAGGCTACC GCTGGCTTTG CCAGCACTTG CCGCAGCTGT TTACCCGTTA TATTCATAAT
GTTGATGAGG CGTAA
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| Protein sequence | MMTSAMLTGK SDQHLVALDG RHRLQPEAVT AFLALQLAAK TAGFNLQPAS TFRDFERQRQ
IWNGKFRGER PVMDANSQPL DVSSLDEGDR CEAILRWSAM PGSSRHHWGS DLDIYDPDLL
PAGSSLQLEP WEYEEGGYFA ALNAWLSAHM HEYGFYRPYA HDLGGVAVEP WHISYYPLAQ
YAEEQLTPDL ILAAWQDEDI AGYRWLCQHL PQLFTRYIHN VDEA
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