Gene PC1_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1127 
Symbol 
ID8132056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1320386 
End bp1321492 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content54% 
IMG OID644864409 
Productperiplasmic binding protein 
Protein accessionYP_003016711 
Protein GI253687521 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTACTG TCTTACTACT TTGTCTGCTT TTCCTCAGCC CATTCCTACA AGCAAAAACG 
GTCACCGATA TGTTGGGCCG ACAGGTGGAA ATACCAGACA ATCCCCAACG CATCATTCTG 
GGTGAGAGCC GCATGCTATA TACGCTGGCA CTGCTTCAGC CTGATAACCC GGCAAAGCAT 
GTTGTCGGCT GGCCGGGAGA CATGGCCCGA TACGATGCGC AAAGCTGGTC ACGCTATACC 
GAAAAATTCC CACAGCTTAA CCAGATCCCA CAGTTAGGCA ACGGCAGCCT GCAAGCAATG 
AACGCGGAGA TGCTGCTGCC GCTAAAACCC GATCTGGTCA TTCTTCCCCG GCTGGCAAAA 
AACGCGGCCA ATGAAGATCT GCTGCAACAA ACGCTGACTC GTGCCGGGAT CCCGTTTATT 
TACGTCGACC TGCGTATCGA CCTGCTTAAC AACACGTTAC CCAGTATTCG CCTGCTCGGC 
GAGGTACTGA ATCAGCCCCA GCGCGCTGCC ACCTTCAGCA ATTTCTATCA GCAGCATATG 
GACGTGATTC GCCAGCGTAT AGCGCAATAC CACGGTAAAA AACCGACGGT CATGCTGCAT 
TTGCATCTGG GCAGACGTGA TACCTGCTGC ACCACGGCGG TCGGCGGCAG CCTTGGCGAC 
CTGCTGACTT TCGCTGGCGG CGAGAATATT GCCAACGGCA CCATCAACAG CGTCTACGGG 
GAGTTGAGCC CAGAGCGCGT GCTGGCTGCC AATCCTGATG TCTACATCGC CACCGGCATG 
GCCGGGCCGG AAGGCAAACG TTTCTCCAGT CTGATGCTCG GCCCGCTGGT GAACGCCGCG 
CAGGCGAAAG AGAGCTTCGA CACGCTTATC CGTCAGGAAC CTATTTTGTC TCACCTGCAA 
GCCGTGCAAA CAGGCCGGGC CTGGAGCATG TGGCACAACT TCTACCTCAG CCCGTACCAC 
GTCGTGATGG TCGAAATGTT TGCCAAGGCG CTTTACCCGG ATCGGTTTGC CGATATCGAT 
CCGCAACAAA CACTACAACA ACTCTACCAG CAGTTTTTAC CTATTGAATT TTCAGGGATT 
TATTGGAGTC AGATTTCGCA TGAATAA
 
Protein sequence
MRTVLLLCLL FLSPFLQAKT VTDMLGRQVE IPDNPQRIIL GESRMLYTLA LLQPDNPAKH 
VVGWPGDMAR YDAQSWSRYT EKFPQLNQIP QLGNGSLQAM NAEMLLPLKP DLVILPRLAK 
NAANEDLLQQ TLTRAGIPFI YVDLRIDLLN NTLPSIRLLG EVLNQPQRAA TFSNFYQQHM 
DVIRQRIAQY HGKKPTVMLH LHLGRRDTCC TTAVGGSLGD LLTFAGGENI ANGTINSVYG 
ELSPERVLAA NPDVYIATGM AGPEGKRFSS LMLGPLVNAA QAKESFDTLI RQEPILSHLQ 
AVQTGRAWSM WHNFYLSPYH VVMVEMFAKA LYPDRFADID PQQTLQQLYQ QFLPIEFSGI 
YWSQISHE