| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1097 |
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| Symbol | copA |
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| ID | 8132026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1279377 |
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| End bp | 1282100 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644864379 |
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| Product | copper exporting ATPase |
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| Protein accession | YP_003016681 |
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| Protein GI | 253687491 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAAA CCATCGTGTT GTCATTGCAG GGACTGACCT GCGGACACTG TGTTCAACGC
GTTAAAAAAG CACTGGACGC GCTGCCTGCG GTCGAACAAA CCACCGTCAC ACAACAGTAC
GCCAGCGTCA GCGGCGATGT TGATTCGCAG ACGTTGATCG ACACCATTGA GCAGGCTGGC
TACGAAGCAC AGCCCGCGAC TACGCCGGAT GTGTCCCTCC AGCTTTCCGG CCTGAGCTGC
AATCACTGCG TCGCCGCGAC ACGTAAAGTG CTGGAAGTCA TTCCCGGCGT CGTGGCAACG
GATGTCACCA CAGAGCAGGC CGCCGTGTAT GGCAACGTTG AGGCCACGGT ACTGATTAGC
GCGATTGAAG AAGCCGGCTA TCACGCCAGC GTACAGGAGA GCGCTCACCC AAAAACTGAG
CCGCTGGCAC AGGTAGCGAC AACGCCGGAA GCGCTGCCAG CGGCCGAGAA CACTCTTCCG
GTAACGACAA CACTCGCCAC CAACGATGAC GACAGCGTGC AGCTCCTGCT TCAGGGCATG
AGCTGCGCCA GCTGCGTAAG CCGTGTACAG ACGGCGCTGC AAAGCGTCAG CGGCGTCACG
CAGGCGCGGG TGAATCTGGC CGAACGCAGT GCGTTGGTCA GCGGTCATGC GGAACCGGAA
GCGTTGATTG CCGCCGTAGA ACAAGCAGGC TATGGGGCGG AAATCATTCA GGACGAAGAA
GCGCGCCGCG CACGCCAGCA GCAAACCTCA CAGCAAGCTA TCCGCCGCTT CCAATGGCAG
GCCGCGCTGG GTTTACTGCT TGGTGTACCA CTGATGCTGT GGGGCGTATT GGGCGGCAGT
ATGAGCCTGA CGCCAGAGAA CCAAACACCG TGGCTCATCA TCGGGATATT GACGCTGGCG
GTGATGGTGT TGGCTGGCAG CCATTTTTAC CGTAACGCCT GGCGTAGCCT GAAAAACGGT
GCCGCCACCA TGGATACGCT GGTCGCACTG GGAACGGGCG CAGCATGGCT TTATTCCATT
ACCGTTAACC TGTGGCCAGA GCTTTTCCCA ATGGCAGCGC GCCATCTTTA CTACGAAGCC
AGCGCGATGA TCATCGGTTT AATCAATCTG GGCCATGCGC TGGAGCAGCG CGCCCGCCAG
CGATCTTCTC GTGCGCTGGA ACGGCTACTC GATTTGACGC CCCCTACCGC ACGCGTCGTG
ACGGCAGAAG GTGAAAAATC CATTCCGTTA TCCGACGTAC AGTCCGGCAT GACGCTGCGC
CTGACAACCG GCGATCGTAT TCCTGTCGAT GGTGAGATTT TGCAAGGCGA AATGTGGGTG
GATGAAGCCA TGCTGACCGG GGAACCGATC CCACAATCCA AAACGACTGG CGACAACGTG
CACGCCGGTA CGCTGGTTTC CGACGGCAGC GTCCTCTTCC GGGCAGACGC GATCGGCAAC
CAAACGACCC TGTCGCGAAT CATCCGGCTG GTCAGACAGG CGCAAAGCAG CAAACCCGCC
ATCGGTCAGT TAGCGGATCG TATCTCTGCC GTGTTTGTTC CCGTTGTCGT GGCTATTGCG
CTTCTCAGCG GCGCGATCTG GTTCTTCGTG GGGCCACAGC CGCAGATAGT CTATACGCTC
ATTATCGTCA CGACTGTCCT GATCATTGCC TGCCCTTGTG CGCTTGGGCT GGCAACGCCG
ATGTCGATTA TTTCCGGCGT CGGACGTGCC GCAGAATTTG GTGTGCTGGT ACGGGATGCC
GATGCCTTAC AGCAGGCCAG CAAGCTGGAT GTGCTGGTGT TTGACAAAAC CGGTACGCTA
ACCGAAGGGC AGCCGCGCGT CGTGGCGGTT CATACCTTCG GTGATGTGAC GGAAACACAG
GCGCTAGCCT GGGCGGCCTC TCTCGAACAG GGCTCTAATC ACCCGCTGGC AAAAGCGATT
CTTGAACGCG CAGAGAATCT GCCGCTCACC CCAGCCGAGC AGTTCCGTAC GCTACGCGGT
CTCGGCGTCA GCGGCAAGAT CGGCGACACC AACCTGCTGC TGGGGAATCC AGCGCTACTT
AAACAACACC AGGTCGATAT CACCGAAGGC GAAGCGCTGA TCAACGAGCA GGCTCAGCGC
GGCATCACGC CGGTGTTGCT TGCGGCGAAT GGTCATATCA TCGCGGTGTT ATCTATCCAC
GATCCGCTGC GCGCAGATAG CGTCAGCGCC TTGCAGCGTC TGCACCGGCA GGGCTATCAG
CTCGTTATGC TAACGGGAGA CAACCCGCTC ACAGCGAAGA GCATCGCGAC AGAAGCGGGT
ATCGACCAAG TGATTGCCGG GGTGCTGCCA GACGGCAAAG CGGACGCGAT CAAAAAGCTA
CAGGCTCAAG GCAAACGCGT GGCAATGATT GGTGATGGCA TCAACGATGC GCCAGCACTG
GCGCAGGCCG ATGTCGGTAT TGCGATGGGC GGAGGTAGCG ATATTGCGAT TGAAACCGCC
GCTATCACGC TGATGCGTCA CAGCCTGCAT GGCGTCGCCG ATGCGCTGGC GCTCTCCAAT
GCCACGCTGC GCAACATGAA GCAGAACCTG CTCGGCGCGT TTATCTATAA CTCGCTGGGG
ATCCCGATCG CGGCAGGCGT GCTTTACCCG CTGACCGGCG CGCTACTCAG CCCGGTGGTC
GCCGGTGCCG CTATGGCGCT CTCCTCCATC ACGGTAGTCA GTAACGCCAA CCGCCTGCTT
CGCTTTAAAC CTAAAAGTGA GTAA
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| Protein sequence | MSQTIVLSLQ GLTCGHCVQR VKKALDALPA VEQTTVTQQY ASVSGDVDSQ TLIDTIEQAG
YEAQPATTPD VSLQLSGLSC NHCVAATRKV LEVIPGVVAT DVTTEQAAVY GNVEATVLIS
AIEEAGYHAS VQESAHPKTE PLAQVATTPE ALPAAENTLP VTTTLATNDD DSVQLLLQGM
SCASCVSRVQ TALQSVSGVT QARVNLAERS ALVSGHAEPE ALIAAVEQAG YGAEIIQDEE
ARRARQQQTS QQAIRRFQWQ AALGLLLGVP LMLWGVLGGS MSLTPENQTP WLIIGILTLA
VMVLAGSHFY RNAWRSLKNG AATMDTLVAL GTGAAWLYSI TVNLWPELFP MAARHLYYEA
SAMIIGLINL GHALEQRARQ RSSRALERLL DLTPPTARVV TAEGEKSIPL SDVQSGMTLR
LTTGDRIPVD GEILQGEMWV DEAMLTGEPI PQSKTTGDNV HAGTLVSDGS VLFRADAIGN
QTTLSRIIRL VRQAQSSKPA IGQLADRISA VFVPVVVAIA LLSGAIWFFV GPQPQIVYTL
IIVTTVLIIA CPCALGLATP MSIISGVGRA AEFGVLVRDA DALQQASKLD VLVFDKTGTL
TEGQPRVVAV HTFGDVTETQ ALAWAASLEQ GSNHPLAKAI LERAENLPLT PAEQFRTLRG
LGVSGKIGDT NLLLGNPALL KQHQVDITEG EALINEQAQR GITPVLLAAN GHIIAVLSIH
DPLRADSVSA LQRLHRQGYQ LVMLTGDNPL TAKSIATEAG IDQVIAGVLP DGKADAIKKL
QAQGKRVAMI GDGINDAPAL AQADVGIAMG GGSDIAIETA AITLMRHSLH GVADALALSN
ATLRNMKQNL LGAFIYNSLG IPIAAGVLYP LTGALLSPVV AGAAMALSSI TVVSNANRLL
RFKPKSE
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