Gene PC1_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1040 
Symbol 
ID8131969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1211533 
End bp1211865 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content48% 
IMG OID644864323 
Productcytochrome o ubiquinol oxidase subunit IV 
Protein accessionYP_003016625 
Protein GI253687435 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0716905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATT CAACAACCGA TCATTCAGGT GCTAGCCACG GTAGTGTTAA GTCATACGTA 
ATAGGTTTTG TACTGTCAGT AATTTTGACC GTCATTCCTT TCAGTATGGT CATGAGCGGC
ACTGCCTCAC ATAACGCCAT TCTTTTCACG GTGGTGGGAT GTGCAGTGGT TCAGATTCTG
GTGCATCTGG TGTACTTCCT GCACCTGAAT ACGTCCTCAG AAGAGCGCTG GAACGTGGTG
GCTCTTGTGT TTGCCGTCCT GATTATCGCC ATTGTCGTCG TGGGCTCCAT CTGGATTATG
ATGAGCGCAC ACCACAATAT GATGATCCAG TAA
 
Protein sequence
MSHSTTDHSG ASHGSVKSYV IGFVLSVILT VIPFSMVMSG TASHNAILFT VVGCAVVQIL 
VHLVYFLHLN TSSEERWNVV ALVFAVLIIA IVVVGSIWIM MSAHHNMMIQ