Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1040 |
Symbol | |
ID | 8131969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1211533 |
End bp | 1211865 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644864323 |
Product | cytochrome o ubiquinol oxidase subunit IV |
Protein accession | YP_003016625 |
Protein GI | 253687435 |
COG category | [C] Energy production and conversion |
COG ID | [COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 |
TIGRFAM ID | [TIGR02847] cytochrome o ubiquinol oxidase subunit IV |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0716905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCATT CAACAACCGA TCATTCAGGT GCTAGCCACG GTAGTGTTAA GTCATACGTA ATAGGTTTTG TACTGTCAGT AATTTTGACC GTCATTCCTT TCAGTATGGT CATGAGCGGC ACTGCCTCAC ATAACGCCAT TCTTTTCACG GTGGTGGGAT GTGCAGTGGT TCAGATTCTG GTGCATCTGG TGTACTTCCT GCACCTGAAT ACGTCCTCAG AAGAGCGCTG GAACGTGGTG GCTCTTGTGT TTGCCGTCCT GATTATCGCC ATTGTCGTCG TGGGCTCCAT CTGGATTATG ATGAGCGCAC ACCACAATAT GATGATCCAG TAA
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Protein sequence | MSHSTTDHSG ASHGSVKSYV IGFVLSVILT VIPFSMVMSG TASHNAILFT VVGCAVVQIL VHLVYFLHLN TSSEERWNVV ALVFAVLIIA IVVVGSIWIM MSAHHNMMIQ
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