| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1039 |
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| Symbol | |
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| ID | 8131968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1210628 |
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| End bp | 1211518 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864322 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_003016624 |
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| Protein GI | 253687434 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0496396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAGC AATACCTGCA AGTTACTAAA CCAGGAATTA TTTTCGGAAA TCTGATTTCC
GTTATCGGTG GATTTCTCCT TGCGGCCCAA GGCCGCATTG ATTATCCCCT GTTTCTCGCC
ACTCTTGTGG GGGTGTCGTT AGTCGTTGCG TCTGGCTGCG TATTTAACAA CGTCATTGAC
CGCGACATCG ACAAGAAAAT GGAGAGAACC AAAAATCGGG TTCTGGTAAA GGGGCTGATT
TCACTGAAGG TAACGCTGGT TTACGCATCG CTGTTAGGTA TTGCGGGCTT TGCTCTGCTG
TACATCGCGG CTAACCCGCT GGCCATGTGG CTGGCGGTGA TGGGCTTCGT TGTGTATGTC
GGCGTGTATA GCCTGTATAT GAAGCGGCAT TCTGTTTATG GCACGCTGAT TGGCAGCCTG
TCAGGCGCAG CACCACCGGT TATCGGTTAC TGTGCCGTCA GCAACCAGTT TGATGCTGGC
GCGTTGATTC TGCTGCTGAT CTTTAGCCTG TGGCAAATGC CCCATTCATA CGCGATTGCG
ATTTTCCGCT TCAAGGATTA TCAGGCCGCC AACATCCCGG TGCTGCCGGT TGTGAAAGGT
ATCTCCGTTG CGAAAAACCA CATTACGCTG TATATCGTGG CGTTTGCGGT CGCAACATTG
ATGCTGTCTC TCGGCGGTTA TGCTGGCTAC AAATATCTGA TCGTTGCCGC AGCCGTTAGC
GTGTGGTGGT TGGGCATGGC GCTGTCAGGC TATAAAAACG CGATTGATGA CCGTGTATGG
GCAAGAAAAC TGTTTGTTTT CTCCATCGTT GCGATTACCT CACTGAGCGT GATGATGTCT
GTGGATTCAA TGGCGCCAGC GCATGAAGTT CTGCTGACCT ACCTGCGTTA A
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| Protein sequence | MIKQYLQVTK PGIIFGNLIS VIGGFLLAAQ GRIDYPLFLA TLVGVSLVVA SGCVFNNVID
RDIDKKMERT KNRVLVKGLI SLKVTLVYAS LLGIAGFALL YIAANPLAMW LAVMGFVVYV
GVYSLYMKRH SVYGTLIGSL SGAAPPVIGY CAVSNQFDAG ALILLLIFSL WQMPHSYAIA
IFRFKDYQAA NIPVLPVVKG ISVAKNHITL YIVAFAVATL MLSLGGYAGY KYLIVAAAVS
VWWLGMALSG YKNAIDDRVW ARKLFVFSIV AITSLSVMMS VDSMAPAHEV LLTYLR
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