| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1037 |
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| Symbol | |
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| ID | 8131966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1207594 |
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| End bp | 1208958 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864320 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003016622 |
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| Protein GI | 253687432 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.282493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATA ATAAAATGAC CCCTGGCGAA TTACGCGCCA CATGGGGCTT GGGAGCCGTT
TTTTCACTGC GCATGCTCGG CATGTTCATG GTGCTGCCTG TGCTAACGAC TTACGGCATG
GCATTACAAG GCGCCAGTGA AGCACTGATC GGGATTGCGA TTGGTATTTA TGGCCTGATG
CAGGCTATTT TCCAGATTCC CTTCGGCCTG GTCTCCGACC GTATCGGCAG AAAGCCTCTG
ATAGTTGGAG GACTGCTGAT TTTTGCGGCC GGCAGCGTCA TCGCCGCACT CAGCGACTCC
ATCTGGGGCA TTATCCTTGG TAGGGCTTTG CAGGGCGCGG GTGCCATCTC CGCTGCCGTC
ATGGCATTGC TTTCCGACCT GACGCGTGAA CAGAACCGAA CGAAAGCGAT GGCATTTATC
GGCGTAAGCT TCGGTGTCAC CTTTGCTATC GCGATGGTCG TCGGTCCTAT CGTTACCCAC
GCCTTCGGTT TACAGGCGCT CTTCTGGGGT ATCGCTCTTT TATCACTCGC TGGCATTGTT
ATTACTCTGA CCCTGATTCC TTCCGCACCA GCACACGTTC TGAATCGGGA ATCCGCGATG
GTACGCGGCA GTTTTCGCAA AGTGCTTGGC AATAGCCGTC TGCTGAAACT GAATATCGGC
ATCATGTGCC TGCATATTTT ATTGATGTCG AGCTTCGTCG CCCTGCCCCG CGCGATGGAG
TCCGCTGGAC TGGCACCACA GGACCACTGG AAAGTCTATT TGGTCACCAT GCTGATCTCC
TTTGCAGGCG TTGTACCTTT CATTATTTAT GCCGAAGTGA AAAGGCGGAT GAAGCAGGTC
TTCATCGGCT GCATCGTGGT GCTGATCGCC GCAGAGGTGG TCTTATGGGG TTCAGGTAAC
CATCTCTGGC AAATTATCAT CGGCATACAG CTGTTCTTCC TGGCTTTCAA CGTGATGGAA
GCACTGTTGC CATCGCTGAT TAGCAAGGAA TCACCAGCGG GATATAAAGG CACGGCGATG
GGCGTTTACT CCACCACGCA ATTTATCGGT GTAGCCATTG GAGGGAGTCT CGGCGGCGGG
CTGTTTGAGC TTTATGGCGC TTCTACCGTG TTTATGGGTG GCGCAGCCAT TGCGGCCATT
TGGCTACTCG TCAGCTTCAC CATGCAAGAA CCACCTTATC TAAGCAGTTT GAGAATCGCT
CTGTCCGATG TAGCGTTGCA GGATCGTGAG CTGGAACAGA AAATGCGTAC ACAGCCCGGC
GTTGCCGAGG TCGTTATCGT GCCGGATGAG TACAGCGCCT ATGTGAAGAT CGACAACAAA
AAGACCAGTC GGCAGCAGCT AGAACAACTC GCAGGCCAGA TCTGA
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| Protein sequence | MNDNKMTPGE LRATWGLGAV FSLRMLGMFM VLPVLTTYGM ALQGASEALI GIAIGIYGLM
QAIFQIPFGL VSDRIGRKPL IVGGLLIFAA GSVIAALSDS IWGIILGRAL QGAGAISAAV
MALLSDLTRE QNRTKAMAFI GVSFGVTFAI AMVVGPIVTH AFGLQALFWG IALLSLAGIV
ITLTLIPSAP AHVLNRESAM VRGSFRKVLG NSRLLKLNIG IMCLHILLMS SFVALPRAME
SAGLAPQDHW KVYLVTMLIS FAGVVPFIIY AEVKRRMKQV FIGCIVVLIA AEVVLWGSGN
HLWQIIIGIQ LFFLAFNVME ALLPSLISKE SPAGYKGTAM GVYSTTQFIG VAIGGSLGGG
LFELYGASTV FMGGAAIAAI WLLVSFTMQE PPYLSSLRIA LSDVALQDRE LEQKMRTQPG
VAEVVIVPDE YSAYVKIDNK KTSRQQLEQL AGQI
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