| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1035 |
|---|
| Symbol | |
|---|
| ID | 8131964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 1205946 |
|---|
| End bp | 1206854 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644864318 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_003016620 |
|---|
| Protein GI | 253687430 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.324105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA CCGTTCTTGG CTGTGGCGCG CTAGGCCAAC TTTGGCTCGC CGCGCTGCAT
CAGCAAGGGC ATGATGTCCA GGGATGGCTG CGTATTCCGC AACCTTATTG TCCGGTCAAT
GTCACGATGC TGGACGGTCA GCACTGTAAT CTCAACCTGA CGGCTAACGA TCCCGAACAC
CTTGCCCAAA GCGAATTGCT GCTGGTAACG TTAAAAGCCT GGCAGGTTTC CGATGCCGTT
ACCGTGCTGC TGCCACAGCT CAACCCACAC TGCACGATTC TGCTTTTACA CAACGGGATG
GGCACGCGGG AAGAATTACC GTCGCTACAG CAGCCACTGG TACTGGGTAT CACCACTCAT
GCCGCCCGGC GCGACGCAAA CAACGTCGTG CATGTTGCCG CAGGCACAAC GCATATCGGT
ACGTTTAATG GCGACAGCAG CCAAAGTCAT CTGGCCGAAG TGCTGCATCA GGCCTTACCT
GATGTCGCCT GGCACACCAA TATTAGCGCC ACCTGCTGGC TGAAGCTGGC GGCTAACTGT
GTCATCAACC CACTCACGGT GAAATATCAC TGCACCAATG GCGAGCTTTC TGCGTACCCG
GAATTGATTG CGTTGCTTTG TCAGGAAGTG GCCAGCGTCA TGGAACGAGA GGGTTTCCAT
ACATCGCGAG ACAGTCTGCT GCTCTACGTT AATCAAATTA TTCTGAACAC CGCAGCAAAC
ACCTCATCAA TGTTGCAGGA CATCATCGCT CAGCGACATA CCGAAATTGA CTACATCACC
GGGTATTTAC TGCACCGTGC GCGCCTCCAC GGCCTGACGC TCCCCGAAAA TGCCCGCCTG
TTTGACTACA TTAAGCAAAA GGAAAATGAT TATGACCGCA TCGGCACTGG TGTGTCTGGC
ACCTGGTAG
|
|---|
| Protein sequence | MKITVLGCGA LGQLWLAALH QQGHDVQGWL RIPQPYCPVN VTMLDGQHCN LNLTANDPEH
LAQSELLLVT LKAWQVSDAV TVLLPQLNPH CTILLLHNGM GTREELPSLQ QPLVLGITTH
AARRDANNVV HVAAGTTHIG TFNGDSSQSH LAEVLHQALP DVAWHTNISA TCWLKLAANC
VINPLTVKYH CTNGELSAYP ELIALLCQEV ASVMEREGFH TSRDSLLLYV NQIILNTAAN
TSSMLQDIIA QRHTEIDYIT GYLLHRARLH GLTLPENARL FDYIKQKEND YDRIGTGVSG
TW
|
|---|
| |