| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1033 |
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| Symbol | |
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| ID | 8131962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1203877 |
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| End bp | 1205325 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864316 |
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| Product | thiamine biosynthesis protein ThiI |
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| Protein accession | YP_003016618 |
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| Protein GI | 253687428 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
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| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTTTA TCATTAAATT GTTCCCGGAA ATCACCATCA AGAGCCAATC TGTGCGATTG
CGCTTTATCA AGATTCTAAC CGGAAACATT CGCAACGTAT TAAAACACTA TGATGAAACG
CTGGCGGTTG TCCGTCACTG GGATCATATC GAAGTTCGGG CCAAAGACGA AAGCCAGCGT
TCGGCGATTC GTGATGCGTT GACGAGAATT CCGGGTATCC ACCATATTCT GGAAGTTGAA
GATCACGCCT ATACCGATGT GCACAATATC TTTGAACAGG CGCTGGCGCT ATATCGCGAG
CAACTGGAAG GCAAAACGTT TTGTGTACGA GTGAAACGCC GCGGTAAGCA TGAGTTTAGT
TCACAGGACG TCGAACGCTA CGTCGGCGGC GGTCTGAACC AGCACATTGA AACGGCGCGG
GTCAACCTTA CAGCACCGCA GGTTACCGTG CATCTGGAAA TCGAGCAGGA CCGTTTGCTG
CTGATTAAAG GACGTTATGA AGGGATCGGC GGCTTCCCGA TCGGTACGCA GGAAGATGTG
CTGTCGTTGA TTTCCGGTGG TTTTGACTCC GGTGTATCCA GCTACATGCT GATGCGTCGA
GGGTGTCGTG TGCATTATTG TTTCTTCAAT CTTGGTGGTG CGGCACATGA GATTGGTGTG
AAACAGGTAG CGCACTATCT GTGGAACCGT TTTGGTAGCT CGCACCGGGT GCGTTTTATT
GCTATCGACT TCGATCCTGT GGTGGGTGAA ATTCTGGAGA AGGTTGACGA CGGCCAGATG
GGCGTCGTAT TGAAGCGCAT GATGGTGCGT GCGGCCTCCA AAATTGCTGA GCGTTACGGT
GTTCAGGCGC TGGTGACCGG TGAAGCGTTA GGGCAGGTTT CCAGCCAGAC GTTGACCAAT
CTACGTTTGA TCGATAATGC CTCTGATACG CTGATTCTAC GTCCGCTGAT TTCTCATGAT
AAAGAACACA TTATCAAACA GGCTCGCGAA CTGGGAACGG AAGATTTCGC CAAAACGATG
CCGGAATACT GCGGTGTGAT CTCGAAAAGC CCGACGGTGA AGGCGGTAAA AGCGAAGATT
GAGGCTGAAG AAAGTCACTT TGATTTTGCC ATTCTGGAGC GTGTGGTGAG CGAAGCGCGG
AATATTGATA TCCGTCAGAT CGCCGAGCAG ACCAAGCAAG AAGTGGTTGA AATCGAAACG
GTCGCGTCAT TCGCCCCAAC TGACGTACTG CTGGATATCC GCTCGCCGGA TGAACAGGAC
GATAAGCCGC TTGAGCTTGA TCAGATCGAA ATCAAATCCT TACCGTTCTA CAAGTTGGGT
ACGCAGTTTG GCGATTTGGA TCAGAGCAAA ACCTATCTGC TTTACTGCGA GCGTGGCGTA
ATGAGCCGCT TGCAGGCGCT GTACCTGCGC GAGCAAGGCT TTAGCAATGT GAAGGTCTAC
CGACCGTAA
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| Protein sequence | MKFIIKLFPE ITIKSQSVRL RFIKILTGNI RNVLKHYDET LAVVRHWDHI EVRAKDESQR
SAIRDALTRI PGIHHILEVE DHAYTDVHNI FEQALALYRE QLEGKTFCVR VKRRGKHEFS
SQDVERYVGG GLNQHIETAR VNLTAPQVTV HLEIEQDRLL LIKGRYEGIG GFPIGTQEDV
LSLISGGFDS GVSSYMLMRR GCRVHYCFFN LGGAAHEIGV KQVAHYLWNR FGSSHRVRFI
AIDFDPVVGE ILEKVDDGQM GVVLKRMMVR AASKIAERYG VQALVTGEAL GQVSSQTLTN
LRLIDNASDT LILRPLISHD KEHIIKQARE LGTEDFAKTM PEYCGVISKS PTVKAVKAKI
EAEESHFDFA ILERVVSEAR NIDIRQIAEQ TKQEVVEIET VASFAPTDVL LDIRSPDEQD
DKPLELDQIE IKSLPFYKLG TQFGDLDQSK TYLLYCERGV MSRLQALYLR EQGFSNVKVY
RP
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