| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0946 |
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| Symbol | |
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| ID | 8131875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1095305 |
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| End bp | 1096066 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864230 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_003016532 |
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| Protein GI | 253687342 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00394287 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGTCCG ATAATCAAAA AAATACTCAC GATCTGCCAC CCGCCGGGCC GCGGCATGTT
GCCATTATCA TGGATGGCAA TGGTCGCTGG GCGAAAAGCC GGGGGAAAAT GCGGATTTTT
GGCCATCAGG CTGGTGTAAA GGCTGTTCGA CGTTCAGTCA GTTTTGCAGT AAGCCAAGGG
CTGGACGCAC TAACGCTTTA CGCATTTAGT AGTGAAAACT GGAACCGCCC TGCGCAGGAA
GTATCCGCAC TCATGGAGCT GTTTGTTCGG GCGCTGGATA GCGAAGTAAA AAGCCTGCAC
AAGCACAATG TTCGCCTGCG GGTGATCGGA GATATCGGTC GCTTCAGCCC GCGTTTACAA
GAACGCATTC GCCGTTCAGA GGCGCTGACA GAAAAGAATC AGGGGCTCAC ACTGAATATT
GCCGCGAATT ATGGCGGCCG TTGGGATATT ATTCAGGGAG TACGGCAACT TGCAGAGCAG
GTCCAGGAAG GCATTCTGCG CCCTGATAGC ATTAATGAAG CGTCATTATG TCAGTACATC
TGTCTGAATG ATCTAGCTCC GGTTGATTTG GTGATCAGAA CCGGTGGAGA ACACCGCATC
AGTAATTTTC TTCTGTGGCA AATTGCTTAT GCTGAACTTT ACTTTACTGA TGTCCTCTGG
CCTGATTTCG ATGAACAAGT CTTTGAAGGT GCGCTGAATG CTTTTGCACA ACGCGAGCGC
CGCTTCGGGG GAACAACACC TATCGATGCT GATGCATCCT AG
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| Protein sequence | MPSDNQKNTH DLPPAGPRHV AIIMDGNGRW AKSRGKMRIF GHQAGVKAVR RSVSFAVSQG
LDALTLYAFS SENWNRPAQE VSALMELFVR ALDSEVKSLH KHNVRLRVIG DIGRFSPRLQ
ERIRRSEALT EKNQGLTLNI AANYGGRWDI IQGVRQLAEQ VQEGILRPDS INEASLCQYI
CLNDLAPVDL VIRTGGEHRI SNFLLWQIAY AELYFTDVLW PDFDEQVFEG ALNAFAQRER
RFGGTTPIDA DAS
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