Gene PC1_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0875 
Symbol 
ID8131801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1018743 
End bp1019372 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content55% 
IMG OID644864156 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003016461 
Protein GI253687271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGAAC GGGATGAAAA ACTGACATCA ACACGGGCGA AAACCCGTCG TTTATTGATT 
GATACCGCCA TGAATATGTT CGACCAAGGC ATATTCCCCT CCATTACCGA TGTTGCCGCT 
GCGGCTCAGC TTTCACGCGC GACGGCTTAT CGTTATTTTC CGACGCAAAG TGCGTTAGTC 
TCCGCCGTGG TCGGCGAAAG CCTCGGCCCC ATTCTGGCGT GGCACCCGAC ACAGCCGCAT 
GCCAGCGAAC GCGTTGCCGA ACTGCTGCAT TTTGCTTACC CCAGGATGCT GGAGCATGAA 
GGCGCGCTGC GTGCCGCCTT GCATCTGTCA CTGCAACAAT GGGCCGACCG CCGTTCTAAT 
CGCCTCCACA CGGATACGCT GACGCGTGGC AATCGTAAAC GTCTGCTCAA GATTGCTACC 
GAACCGCTGG AAGGGAAAAT CACGCCGGAA GCACAACAGC GGGTGATTTA TGCCTTATCC 
CTCATTTACG GTTCCGAGGT TTTTCTGGTG CTGAAAGATA TCTGGCATCT GGAAGAAGAC 
AGTATTCAGG ATGTTACGCA GTGGGTCGCC AAAGCCATTT TACGGCAGGC TGAAGAGGAT 
GCCGCGCAGG CCGATTCACC CAAAACCTAA
 
Protein sequence
MIERDEKLTS TRAKTRRLLI DTAMNMFDQG IFPSITDVAA AAQLSRATAY RYFPTQSALV 
SAVVGESLGP ILAWHPTQPH ASERVAELLH FAYPRMLEHE GALRAALHLS LQQWADRRSN 
RLHTDTLTRG NRKRLLKIAT EPLEGKITPE AQQRVIYALS LIYGSEVFLV LKDIWHLEED 
SIQDVTQWVA KAILRQAEED AAQADSPKT