| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0647 |
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| Symbol | |
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| ID | 8131570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 749277 |
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| End bp | 751031 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644863931 |
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| Product | ssDNA exonuclease RecJ |
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| Protein accession | YP_003016238 |
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| Protein GI | 253687048 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.252802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACCC AACTCCGTCG GCGTCCGCTG GCGGAGGACA TTGATTTACC TGACACCGTT
CCGCCCTTGC TACGCCGCCT CTATGCGCAG CGCGGCGTTA AAGCGGCTCA GGAGCTGGAA
CGTAGCCTGA GTGGTTTACT CAATTACCGG TTGCTAAGTG GTATTGATAA TGCGGTCGAC
CTGCTGCAAA AAACGCTGGC TGAGAAGCGC TGCATCGTCA TCGTTGGCGA TTTTGATGCC
GACGGCGCTA CCAGCACGGC GCTTACTGTA TTAGCGCTGC GCAGCATGGG CTGCGTGAAT
GTGAAATATC TGGTGCCTAA CCGTTTTGAA GACGGTTACG GGCTCAGCCC GGAAGTCGTG
GCGCAGGCTG CTGCACTAGG TGCTGAAGTG ATTGTGACCG TGGATAACGG GATCTCTTCT
CATGCCGGCG TCGAAGACGC GCATCGCCGT GGTATCACCG TGCTGGTGAC CGATCACCAC
CTGCCGGGCG AAATCTTGCC TGACGCCGAC GCCATGATTA ACCCCAATCT GCCCGACTGC
CAGTTTCCCT CCAAGGCGCT GGCGGGCGTG GGTGTCGCGT TTTATCTGAT GATGGCGCTG
TTCGTGCGCC TGCGTGATAG TGACTGGTTT ACGCAACCCT TGTTTACGCA ACAGGGGCTG
GTGAAACCGA ATCTCACCGA ATTACTGGAT TTAGTGGCGC TGGGCACGGT CGCTGACGTC
GTGCCGCTGG ATGCCAATAA CCGAATTCTG GTGGCGCAGG GGTTAAATCG TATTCGTGCG
GGTGAATGTC GTCCGGGTAT TCGGGCGCTG CTGGAAGTGG CGAACCGCGA TGCCAGCCAA
CTGGTCTCCA GCGATTTAGG CTTTGCGTTA GGCCCACGGC TGAACGCCGC CGGTCGACTA
CACGACATGA AGATCGGCGT CGAATTACTG CTCAGCGATG ACATCGTACA AGCGCGCATC
CTTGCCAACG AACTGAATGA CATGAATCAG GACAGGCGTG ACATTGAGCA GGGAATGCAG
GCAGAAGCGC TGCATCTGTG CGAATCGCTG GAACGCACCC GTACTGAGTT ACCATACGGG
CTGGCGATGT ACCACCCGGA GTGGCATCAG GGCGTTGTCG GTATTCTGGC GTCGCGTATT
AAAGAGCGTT TTCATCGCCC GGTGATTGCC TTTGCACCCG CGGGCGACGG CATGCTGAAA
GGGTCAGGGC GCTCCATTGC GGGTTTGCAT CTGCGCGATG CGCTGGAACG GCTGGATACG
CTGTATCCCG GTATGATGGA AAAATTCGGC GGACATGCGA TGGCGGCAGG ATTATCTCTG
CACGAAGATC GGTTCGAGGA TTTCCGTCAG CGCTTCGGCG AGCTGGTTGG CGAATGGCTC
GATCCGTCTC AACTGGAAGG CGTTGTCTGG TCCGATGGTG AACTGGTACT GCCGGAACTG
GATCTGCTCT CAACAGCAGA AATGCTGCGT TATGCGGGGC CGTGGGGGCA GTCATTCCCT
GAGCCGACAT TCGATGGGCG CTTTCGGATT CTGCAACCCC GTCTACTCAA AGAACGTCAT
TTAAAAGCGA TGTTTGAACC GATCGGCGCG ACAGGGAAGG TGCCGTTGTT GGATGGCATC
GCGTTTAATG TTGATACCAC CATCTGGCCG GATCCGAGTA TCAAAGAAGT GGAAATCGTG
TACCGGCTGG ATATTAACGA GTTTCGCGGT AAACGTTCGG TGCAATTGTT GATTCAACAT
CTGTGGCCAC GCTAG
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| Protein sequence | MITQLRRRPL AEDIDLPDTV PPLLRRLYAQ RGVKAAQELE RSLSGLLNYR LLSGIDNAVD
LLQKTLAEKR CIVIVGDFDA DGATSTALTV LALRSMGCVN VKYLVPNRFE DGYGLSPEVV
AQAAALGAEV IVTVDNGISS HAGVEDAHRR GITVLVTDHH LPGEILPDAD AMINPNLPDC
QFPSKALAGV GVAFYLMMAL FVRLRDSDWF TQPLFTQQGL VKPNLTELLD LVALGTVADV
VPLDANNRIL VAQGLNRIRA GECRPGIRAL LEVANRDASQ LVSSDLGFAL GPRLNAAGRL
HDMKIGVELL LSDDIVQARI LANELNDMNQ DRRDIEQGMQ AEALHLCESL ERTRTELPYG
LAMYHPEWHQ GVVGILASRI KERFHRPVIA FAPAGDGMLK GSGRSIAGLH LRDALERLDT
LYPGMMEKFG GHAMAAGLSL HEDRFEDFRQ RFGELVGEWL DPSQLEGVVW SDGELVLPEL
DLLSTAEMLR YAGPWGQSFP EPTFDGRFRI LQPRLLKERH LKAMFEPIGA TGKVPLLDGI
AFNVDTTIWP DPSIKEVEIV YRLDINEFRG KRSVQLLIQH LWPR
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