| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0622 |
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| Symbol | gcvT |
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| ID | 8131545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 723554 |
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| End bp | 724669 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863906 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_003016213 |
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| Protein GI | 253687023 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.785949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGC AGACCCCGTT GTATCAACAA CATCTGGCCG ATGGCGCCAA AATGGTGGAT
TTTCACGGCT GGATGATGCC GCTGCATTAC GGTTCTCAAC TGGATGAGCA TCATATTGTG
CGCCGGGAAG CCGGTATTTT TGATGTTTCC CACATGACTA TCGTCGATTT GCATGGTGCG
AGAACGCGTG AATTCCTGCG TTATCTGTTG GCGAATGATG TCGCCAAACT CACACAGCCG
GGCAAAGCGC TTTATACCGG CATGCTGAAT GCTTCCGGTG GTGTCATCGA CGATCTGATC
GTTTATTTTC TTACGGAAGA CTATTTCCGG TTGGTCGTGA ACTCTGCGAC CCGCGAAAAA
GATCTCGCCT GGATTGAACA GCACGCTGCA CCTTTTGGTA TTGAAATCCG TGAGCGTGAG
GATCTGGCGC TTGTCGCGGT ACAAGGTCCG CAGGCACAGG AAAAAGTGCA AGCAATCCTG
AAGGCAAAAG GTCTGAGTGA TGCCGACGTG GCTGCGGTTG CCAGCATGAA GCCGTTTTTT
GGCAAGCAGG CGGGGGATTT CTTCGTAGCT ACGACGGGTT ATACGGGCGA AGCTGGTTAT
GAAATCGCGC TGCCGAATGA GCAAGTGGTC GATTTCTGGC AGCAACTGCT GGCCGCGGGC
GTGAAGCCAT GCGGACTGGG CGCACGCGAT ACGCTGCGCC TGGAAGCGGG AATGAACCTG
TACGGTCAGG ATATGGATGA GGGCATTTCG CCGCTGGCGG CCAACATGGG CTGGACGATC
GCCTGGCAGC CGGAGGATCG CCAGTTTATC GGGCGTGAAG CCTTAACGCA TCAGCGTGAA
AAAGGAACCG ATCAACTGGT TGGTTTGGTG CTGACGGAAA AAGGCGTATT GCGCAATGAT
TTACCTGTGC GCTTTACTGA TAGTGATGGC GTGATGCGCG AAGGTGTCAT CACCAGCGGC
TCGTTCTCGC CAACGCTTGG CGTGAGCATT GCGCTAGCGC GTGTTCCGTT GGGAATTGGT
GAACAGGCGA TTGTGCAGAT TCGTAACCGC GAGCTGCCCG TCCACGTCAC CAAGCCCGGC
TTTGTCCGCG CCGGAAAAGC CATCGTTCAG TATTGA
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| Protein sequence | MAKQTPLYQQ HLADGAKMVD FHGWMMPLHY GSQLDEHHIV RREAGIFDVS HMTIVDLHGA
RTREFLRYLL ANDVAKLTQP GKALYTGMLN ASGGVIDDLI VYFLTEDYFR LVVNSATREK
DLAWIEQHAA PFGIEIRERE DLALVAVQGP QAQEKVQAIL KAKGLSDADV AAVASMKPFF
GKQAGDFFVA TTGYTGEAGY EIALPNEQVV DFWQQLLAAG VKPCGLGARD TLRLEAGMNL
YGQDMDEGIS PLAANMGWTI AWQPEDRQFI GREALTHQRE KGTDQLVGLV LTEKGVLRND
LPVRFTDSDG VMREGVITSG SFSPTLGVSI ALARVPLGIG EQAIVQIRNR ELPVHVTKPG
FVRAGKAIVQ Y
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