Gene PC1_0561 details

Gene Information

• Locus tag: PC1_0561
• Symbol: obgE
• ID: 8131479
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 648444
• End bp: 649616
• Gene Length: 1173 bp
• Protein Length: 390 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 644863840
• Product: GTPase ObgE
• Protein accession: YP_003016152
• Protein GI: 253686962
• COG category: [R] General function prediction only
• COG ID: [COG0536] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR02729] Obg family GTPase CgtA

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00587502
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTTG TAGATGAAGC CACAATTCTC GTTGTGGCAG GCGATGGCGG TAACGGTTGT 
GTTAGCTTTC GCCGTGAAAA ATATATTCCT AACGGCGGCC CAGATGGCGG TGACGGCGGT 
GATGGCGGCG ACGTTTATCT GCTGGCTGAC GAAAACCTGA ACACGCTGAT TGACTATCGT 
TTTGAAAAAT CCTTCCGCGC TGAGCGTGGA CAAAACGGGC AAAGTCGCGA CTGTACGGGT 
AAACGCGGTA AAGATATTAC GATTAAAGTC CCTGTTGGTA CCCGTGTTCT GGATCAGGGT 
ACCGGCGAGG TGTTAGGCGA TATGACGCGC CATCAGCAGA GCCTGATGGT CGCGAAAGGC 
GGCTGGCACG GTTTAGGTAA CACGCGTTTT AAATCATCCG TCAACCGTGC TCCTCGCCAG 
AAGACTAGTG GCACGAAAGG TGAAGAACGT GAGCTGACGC TGGAACTGCT GTTGCTGGCT 
GACGTGGGAA TGTTGGGTCT GCCGAACGCA GGCAAATCGA CTTTCATCCG TGCGGTATCA 
GCAGCGAAGC CAAAAGTCGC CGATTATCCG TTTACTACAC TGGTGCCGAG CCTTGGTGTG 
GTTCGCATGG ACAGTGAACA GAGCTTTGTT GTGGCGGATA TCCCTGGTTT GATTGAAGGG 
GCATCCGAAG GCGCTGGGTT AGGTATTCGT TTCCTGAAAC ACCTTGAACG CTGCCGTGTT 
CTGCTGCATT TGGTTGATCT GGCACCGATT GATGAGTCCG ATCCGGTTGA AAATGCTAAA 
ATCATTATCA ACGAGTTAGA GCAGTACGGC GCAGGTTTAG CAGAAAAACC GCGTTGGCTG 
GTTTTCAACA AAGTGGATTT GATCGACAAG GCTGAAGCGG AAAAACGAGC CAAAGAGATT 
GCGACTGCGC TTGGCTGGGA AGGTAAGTAT TACCTGATTT CTGCAGCGAA CCGTGAAGGC 
GTCACCCCAC TTTGCTGGGA CGTAATGAGC TTCCTGAAAG CTAATCCGAA AGTGACGGCG 
ATTGCCGAAA GCGCGCCGGA AAAAGTTGAG TTCATGTGGG ATGATTATCA TCGTCAACAG 
TTGGCTGAAA TAGAAAAAGA AGCCGAAGAA GAGTGGGATG ATGATTGGGA CGATGAAGAT 
GATGAAGGCG TTGAGATTAT CTATCAAAAG TAA 

 

Protein sequence

MKFVDEATIL VVAGDGGNGC VSFRREKYIP NGGPDGGDGG DGGDVYLLAD ENLNTLIDYR 
FEKSFRAERG QNGQSRDCTG KRGKDITIKV PVGTRVLDQG TGEVLGDMTR HQQSLMVAKG 
GWHGLGNTRF KSSVNRAPRQ KTSGTKGEER ELTLELLLLA DVGMLGLPNA GKSTFIRAVS 
AAKPKVADYP FTTLVPSLGV VRMDSEQSFV VADIPGLIEG ASEGAGLGIR FLKHLERCRV 
LLHLVDLAPI DESDPVENAK IIINELEQYG AGLAEKPRWL VFNKVDLIDK AEAEKRAKEI 
ATALGWEGKY YLISAANREG VTPLCWDVMS FLKANPKVTA IAESAPEKVE FMWDDYHRQQ 
LAEIEKEAEE EWDDDWDDED DEGVEIIYQK