| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0418 |
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| Symbol | |
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| ID | 8131333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 480858 |
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| End bp | 481682 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644863696 |
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| Product | rhamnulose-1-phosphate aldolase |
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| Protein accession | YP_003016010 |
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| Protein GI | 253686820 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR02624] rhamnulose-1-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.548183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCAA TTCTCTCTTC CTGGTTTGTA CAGGGAATGA TTAAAGCCAC CAGCGACATG
TGGCTCAAAG GCTGGGACGA ACGTAACGGC GGTAACGTCA GCCTGCGCCT GACGGCTGAG
GATGTGACGC CTTATGAAAG CGATTTCTAT CCGCAGCCGC GCCATGAGGC GCTATCACAG
CCGATGCCGG CGCTGGCAGA CTGCTGGTTT ATCGTCACCG GCTCCGGCAA ATTTTTCCGC
AACGTTCAGT TGGATCCGGC CGATTCACTG GTGGTATTGC AGGTCGATAG CGACGGCAAA
GGCTATCGTA TTTTCTGGGG CCTCACCAAC GGCGGTCTGC CAACGTCTGA ACTCGCCTCG
CATTTCCAGT CGCACATTGT GCGTATGGGT GTGACCCACG GGCACGATCG CGTCATCATG
CACTGCCACG CGACCAATCT GATCGCCCTG AGCTATGTGC TGGAGCTGGA TACCGCTAAA
TTCACCCGTG AACTGTGGGA AGGCAGCACG GAGTGTCTGG TGGTCTTCCC GGACGGCGTG
GGAATTGTGC CGTGGATGGT GCCGGGTACC GACGCCATTG GCGATGCCAC CTCCGAACAA
ATGCAGCGTC ATTCGCTGGT GCTGTGGCCC TTCCACGGTA TCTTCGGCAC CGGTCCGACG
CTGGACGACG CCTTCGGCCT GATCGATACC GCAGAAAAAT CCGCCGAAGT GATGGTGAAA
GTGAGATCGA TGGGCGGTAA GAAGCAGACG ATCTCGACCG AAGAGCTGAT CGCACTGGGT
AAACGTTTCG GCGTCACCCC CATGGAAGTC GCACTACGCG TGTAG
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| Protein sequence | MQAILSSWFV QGMIKATSDM WLKGWDERNG GNVSLRLTAE DVTPYESDFY PQPRHEALSQ
PMPALADCWF IVTGSGKFFR NVQLDPADSL VVLQVDSDGK GYRIFWGLTN GGLPTSELAS
HFQSHIVRMG VTHGHDRVIM HCHATNLIAL SYVLELDTAK FTRELWEGST ECLVVFPDGV
GIVPWMVPGT DAIGDATSEQ MQRHSLVLWP FHGIFGTGPT LDDAFGLIDT AEKSAEVMVK
VRSMGGKKQT ISTEELIALG KRFGVTPMEV ALRV
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