6 homologs were found in PanDaTox collection
for query gene PC1_0407 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012917  PC1_0407  putative DNA-damage-inducible protein J  100 
 
 
94 aa  189  1e-47  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1150  RelB protein  80.85 
 
 
94 aa  129  1.0000000000000001e-29  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2580  transcriptional regulator, CopG family  80.85 
 
 
94 aa  129  1.0000000000000001e-29  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02179  RelB protein  39.76 
 
 
94 aa  60.5  0.000000008  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0521449  n/a   
 
 
-
 
NC_009456  VC0395_0742  CopG family transcriptional regulator  38.1 
 
 
122 aa  59.3  0.00000002  Vibrio cholerae O395  Bacteria  normal  0.716439  n/a   
 
 
-
 
NC_011311  VSAL_p840_54  hypothetical protein  37.35 
 
 
94 aa  55.8  0.0000002  Aliivibrio salmonicida LFI1238  Bacteria  hitchhiker  0.000360582  n/a   
 
 
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