Gene PC1_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0406 
Symbol 
ID8131321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp463124 
End bp464467 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content54% 
IMG OID644863684 
Producthypothetical protein 
Protein accessionYP_003015998 
Protein GI253686808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCGT ACGATTTACT ACTGCAACAG TTGGAAAAAC TCGTCGCTTC ACCAGACAAC 
TATTATCGGC CCGCGCAGGC TGATGCACTG GGTTCAGCGT CACACCTGAT AACGCTCACG 
CGTCACTATA ACGGTCATAT TCGGCAGCGT GCGGTGCTGT GTCTGGGCTT CATGGACGAG 
GTATCGGCAT TGCCAGCGCT GATTGAACGA GTAAATGATT GGGCTGAACC GGTGCGCCGC 
GCGGCCAAGC AGAGCGTGCG GCTGCTGTTA ACACCGAACA ATACCGCGTC TTTTGTCGCC 
AACTTGCCTG CCATTTTCTG GTTGTTGCAG TGTCAGCGGG AAGATCATCA GCCGCTGGTG 
GATGAAATCG TGAGCTTTCT GTCCGAGGAG GCGCACGCGC CGTCGCTATT CGCGGGGTTG 
TGCTCGGAAG ACAAAACCGT CGCCCGATTA TCACTGGATA TTCTCGCTGA GCGTGAGTGC 
TTCCCGTTGA AGCAGATCTT TGGGCAGGCG ATGTTGCATC ACGATCCGTT AGTCAGGGCG 
AACGCGGTGC GGTATCTGCT AAGTGCGGAC AAGGACGTCG ATCACGACGT GTTGACCATT 
CTGTTGAAAG ATTCGTTCGC ACCCATCAAG CAGGTGGCGT TGCAGTATGT GATAGACAAT 
GCGTTCCCCG TGTCTGAGTC TCAACTGATT GCTTTACTGT TTGATAAGAA TGCATTGGTG 
CGTCAGCGAG CCTCAGCGTT ACTGCGCGAA CGAAACGACG ATCCGGTTGC GCATTATCTT 
GCGGTACTGG ATCGGGCGAG TACCGTTACC GTGCGCAAAA CCACGCTCTG GGGGCTGGAT 
GAGCATCGCT ATGACGGCAT TGTGGCGCTG GCGGAGCGCA ATCTGGACGA ACGTTATCCC 
AGCCTTTACT ACAGTGCGTT GCGCATTCTT ATTCTGCGTA CGGGTGACGA TGCACGTGAG 
CGGCTGCTGG ATTCTCTGCG CAATCCTTCG ATTGCTATTA CGAAGGTGGC ACGGAAGCTG 
TTTTACCAGC AGAAAATTTA TCTGTCGCTG TCTGAGCTTC AATGTTGTCT GGACAGCGCG 
TCTTCCAGAG AACACGTTGA GGTGTACTAC TTTCTAGCGC ACAAGCTGAA TAAATGGGAT 
TGGCTGGTGT TCCTGCTGGA TAATGCTAAG TCAGAGAATA CTGCACTCAC GCAGACTGGC 
GTGGCGTACT GGGTACAGCG GTTCAACCGT TCGGGCATGT TACCAGATAC CCGACAGCAG 
GCGCGTCTGC GGACGCTGCT TGATGAAAAC CCGCACGTCA TCTCGCGCGA CAGCCCCTAT 
ATCGCCCTGT TTTTGTATAG CTGA
 
Protein sequence
MASYDLLLQQ LEKLVASPDN YYRPAQADAL GSASHLITLT RHYNGHIRQR AVLCLGFMDE 
VSALPALIER VNDWAEPVRR AAKQSVRLLL TPNNTASFVA NLPAIFWLLQ CQREDHQPLV 
DEIVSFLSEE AHAPSLFAGL CSEDKTVARL SLDILAEREC FPLKQIFGQA MLHHDPLVRA 
NAVRYLLSAD KDVDHDVLTI LLKDSFAPIK QVALQYVIDN AFPVSESQLI ALLFDKNALV 
RQRASALLRE RNDDPVAHYL AVLDRASTVT VRKTTLWGLD EHRYDGIVAL AERNLDERYP 
SLYYSALRIL ILRTGDDARE RLLDSLRNPS IAITKVARKL FYQQKIYLSL SELQCCLDSA 
SSREHVEVYY FLAHKLNKWD WLVFLLDNAK SENTALTQTG VAYWVQRFNR SGMLPDTRQQ 
ARLRTLLDEN PHVISRDSPY IALFLYS