| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0356 |
|---|
| Symbol | |
|---|
| ID | 8131270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 413208 |
|---|
| End bp | 413654 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644863636 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003015951 |
|---|
| Protein GI | 253686761 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAGC GCAAAAGTCT GAAAGAGGAT GCGTGTCCCG TCGCCCGCGC GCTGGATGTG
GTTGGCGATC GCTGGGCGTT GCTGATTATC CGCGATGCCT TCGACAATCG TCGCCGTTTT
AGCGATTTTC AGCGTAGTTT GGGCGTTGCC AAAAATATTC TGACCGACCG CCTGCGCACG
TTGGTTGACG AAGGTATTTT GTCCGTTCAG CCTGTTTCCG ACAGTTCGGC CTATCAGGAA
TATGTCCTGA CGCCAAAAGG CGAGCAACTG TTCCCGCTTG TTGTGGCGTT ACGCCAGTGG
GGGGAGCAGC AACTGTTCGC GGAGGGGGAA CCTCACTCGC TGTTATTGGA CAGACACACT
GGTCAGCCTC TGCAAGCTAT GCTGCCGCAT TCTGCGCAAG GCCAGCCAGT GGTCGGGCAG
GATACATTCG TTCAGAAAGT GGATTGA
|
|---|
| Protein sequence | MVKRKSLKED ACPVARALDV VGDRWALLII RDAFDNRRRF SDFQRSLGVA KNILTDRLRT
LVDEGILSVQ PVSDSSAYQE YVLTPKGEQL FPLVVALRQW GEQQLFAEGE PHSLLLDRHT
GQPLQAMLPH SAQGQPVVGQ DTFVQKVD
|
|---|
| |