| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0329 |
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| Symbol | |
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| ID | 8131243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 380668 |
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| End bp | 383070 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863609 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003015924 |
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| Protein GI | 253686734 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAATTA ACAAGAATTT AAATAAAATT CTTCTCACCG GCATCTTAAC TGGCGTCGCA
CTGAACAGCA TGGCAGCGGA TAGCACCACG GGCAACAACG CACTCAACGG GAAGAGTCAG
GATAATTCAG CGGCGAAAGC GGAACAAACC GACGATGTCA TGACGGTGAA ATCGCCAAAG
ATCGAGAAAA AAGCGGGGTC GAGTACGACG CTGACGGCCG CAGATATGCA AAAAGAAGGC
GGCAACAATT TTGGCACTAT CATGCGCTAT CAACCTCTGG TGAGCGCAAC GGGTGCCAGC
GGCGGCAGTA ATACCGGGAA AAGCGGCTTT GACCGCGGCG GTTACACGGG CTACAACATT
CGTGGGATTG AAAGCAACCG TGTTGCGATC GATACCGATG GCATCGCTCT GCCCAATGCC
ACAGGCCGCA GCTACGCCAG CCGTGCCGGA TTCAATACGT TCGGCATGGG ACGCGACTAT
ATCGACCCTT ACGTGTACAG CAGCGTCGAT ATTGAGTCAG GCGTCACCTC CGCAGAAAAT
ACCATCAACG CGCTCGGAGG AAGTGTCTCC TTTCGGCCAA AATCTGCCGA TGATTATCTG
AAAGCAGGCA AGCAGGACTA CTTTGGTCTC CAGAGTGACT TCGACTCTGC CAACCATGGT
TGGCATAATG GCATCACCGC CGCAGGCGGT GATGACGAAT TGCGCGGCGT GGTCGTACTC
AGCCGCCGCG ACGGTCAGCA AACGCGTAAT AACAGCGACG AGATCGCCGC TTACCCCGCC
AACTGGCACT CTAACGCCAT TTTGGCATCC GGTATTTGGC AGGCCAACGA CGAGCACCAG
CTCACCGGAA CGTTGGATTA TTACCATAAA ACCAACCACA CCCATTATGA TTACTGGGGT
AACCTGCCAA GCGGCAACAA TACCATCTAC GGCACGGCGC AACAGAGCAG CGAGACACGC
CGCTGGACCG CCAGCCTGAA AGATCGCTGG ACGCCTGTTA ACAATACGCT GGTCGATTTG
GTTGATAGCC GCATTTACTT CCAAAACAGC GAATCACACG ACAATACTTG GCTACCGGCA
ACCACAGGGA TGGCAGCGGC GGATAGTCAT CGGGTCTATT CTGACTACAA TGTCACCACT
TATGGATTCG ATACCCATAT GGTGAAAAGC TGGGATCGCC ACGAATTCAG CTGGGGTCTT
AATGCCAGCC AAAGCAAAAC AGAGCGTCCG TTCAGACAAT CACCGAATCA AACAGGTGCC
AATAACATCA TGCAGCCAGA AGCCGACAGC AATAGCTACA CCGTCGGCGG CTTTGTGCAG
GATACCGTTA CGTGGGATCT GGCGGGGCAC GCCTTCTCGG TTGTCCCTGC CGTGCGCGCC
ATCCATCAGC GTACCAAACC GACCAACACG GTTCGCCTGA GCGGTGACGG CAGTGTCATC
AGTGAATCCG ATGTCAACAG ACTGTACGGT AAAGCCAACA GTGATACGCA AGTTCTGCCT
GCGCTGAGCT TCCTCTATGA CATCACTCCG ACGCTGACAA CCTATTTGCA GTACCGTCGT
GGCGCACAGT TCCCGGATGC CAGCCAGCTT TATGGCAGCA CTAACCTGGA CGCCAACTAT
GCCGGACCAT TCCAGTATGC CTTTATCGGC AATAGCGACC TCAAGACGGA AACCAGCAAC
AACGTAGAAT GGGGATTAAA AGGCGAAGCA ACGGAGGGAA TCACCTTCCG TACCGCGCTG
TTCTACAACA CGTATAAGAA CTTTATCGCC AATACCCGCT ACCGTCGTAG CGCCAACCCC
GATAAATTTA CCAATGTGCC AAGCAATATC AGCACGATAT ATCAGGCGGA AAACCGCGAT
AAAGCCTACA TCTACGGTGG TGAGGTCAGC AGCAAAATAC AGTTAGGCAC CTGGTTCCCA
GCGGTTGATG GGCTCAGTAC CACGCTGGCG TTTGGCTACA CCAAAGGCCA ATCGCAATCC
CGCTACCTTG GCGACCGCTA TGTCGATCTC GACAGCGTGG CTCCGATGAA AGCGGTGATA
GGTATCGCCT ACGACGATCC TTCCCAGCGC TACGGTGCCG CCGTGACGTC TACCTTCCAG
AAAGGGAAAC AGGCGAAGGA TACCAGCCGT GAAAGCTACA CCAATGCAGG CAGCGCTATC
ACCACCTCGA GTACCGAATA TATGCGGATT CCCGGCTACG GCATGGTGGA TCTGACCGCC
TACTATCGCG TGACCAAAAA CGTGAAAATC AACGGCGGCG TGTATAACCT GACTGACCGT
AAATACTGGG ATTACCTCAG CAGTCGCCAG ATTGAGACCA ACGATCGGCA GGGGCAGTAT
GATCGCGCCC TCTCCGTGCA GCCTGGTCGA ACCTTCCAAC TGGGTGTGAA CGTGGACTTC
TAA
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| Protein sequence | MLINKNLNKI LLTGILTGVA LNSMAADSTT GNNALNGKSQ DNSAAKAEQT DDVMTVKSPK
IEKKAGSSTT LTAADMQKEG GNNFGTIMRY QPLVSATGAS GGSNTGKSGF DRGGYTGYNI
RGIESNRVAI DTDGIALPNA TGRSYASRAG FNTFGMGRDY IDPYVYSSVD IESGVTSAEN
TINALGGSVS FRPKSADDYL KAGKQDYFGL QSDFDSANHG WHNGITAAGG DDELRGVVVL
SRRDGQQTRN NSDEIAAYPA NWHSNAILAS GIWQANDEHQ LTGTLDYYHK TNHTHYDYWG
NLPSGNNTIY GTAQQSSETR RWTASLKDRW TPVNNTLVDL VDSRIYFQNS ESHDNTWLPA
TTGMAAADSH RVYSDYNVTT YGFDTHMVKS WDRHEFSWGL NASQSKTERP FRQSPNQTGA
NNIMQPEADS NSYTVGGFVQ DTVTWDLAGH AFSVVPAVRA IHQRTKPTNT VRLSGDGSVI
SESDVNRLYG KANSDTQVLP ALSFLYDITP TLTTYLQYRR GAQFPDASQL YGSTNLDANY
AGPFQYAFIG NSDLKTETSN NVEWGLKGEA TEGITFRTAL FYNTYKNFIA NTRYRRSANP
DKFTNVPSNI STIYQAENRD KAYIYGGEVS SKIQLGTWFP AVDGLSTTLA FGYTKGQSQS
RYLGDRYVDL DSVAPMKAVI GIAYDDPSQR YGAAVTSTFQ KGKQAKDTSR ESYTNAGSAI
TTSSTEYMRI PGYGMVDLTA YYRVTKNVKI NGGVYNLTDR KYWDYLSSRQ IETNDRQGQY
DRALSVQPGR TFQLGVNVDF
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