Gene PC1_0294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0294 
SymbolsspA 
ID8131207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp339970 
End bp340611 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content51% 
IMG OID644863574 
Productstringent starvation protein A 
Protein accessionYP_003015889 
Protein GI253686699 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0133166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTCG CTGCCAACAA ACGTTCGGTA ATGACGCTGT TTTCTGGTCC ATCCGACATT 
TTTAGCCATC AGGTCCGCAT CGTATTGGCG GAAAAAGGTG TGAGTGTCGA GATTGAGCAG 
GTAGACATGG ATAATCTGCC TCAGGATCTT ATTGACCTCA ATCCTTACGG TTCCGTGCCA 
ACGCTGGTCG ATCGTGAACT GACGCTCTAT GAATCACGCA TTATCATGGA GTATCTGGAT 
GAACGTTTTC CTCATCCGCC GTTAATGCCT GTCTACCCGG TAGCTCGTGG TAACAGCCGC 
CTGATGATGC ATCGCATTGA GAGCGACTGG TATTCTTTAC TGAAGAAAAT TACCCATGGC 
AGTGCGCAGG AAGCGGACGC GGCGCGTAAG CAACTGCGTG AAGAGCTGCT GGCTATTGCT 
CCGGTGTTTA ACGAAGCACC TTATTTCATG AGCGAAGAGT TCAGTCTGGT GGATTGCTAT 
CTGGCTCCGC TGCTGTGGCG TTTGCCGCAG TTAGGCATTG AACTGAGTGG TTCGGGCGCG 
AAAGAACTGA AAGGCTACAT GACTCGCGTC TTTGAGCGTG ATGCGTTCCT GGCTTCCCTG 
ACGGAAGTGG AACGTGAAAT GCGTTTGCAA ACCCGAGGTT AA
 
Protein sequence
MAVAANKRSV MTLFSGPSDI FSHQVRIVLA EKGVSVEIEQ VDMDNLPQDL IDLNPYGSVP 
TLVDRELTLY ESRIIMEYLD ERFPHPPLMP VYPVARGNSR LMMHRIESDW YSLLKKITHG 
SAQEADAARK QLREELLAIA PVFNEAPYFM SEEFSLVDCY LAPLLWRLPQ LGIELSGSGA 
KELKGYMTRV FERDAFLASL TEVEREMRLQ TRG