| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0237 |
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| Symbol | |
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| ID | 8131150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 282191 |
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| End bp | 283156 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863518 |
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| Product | tRNA-dihydrouridine synthase B |
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| Protein accession | YP_003015833 |
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| Protein GI | 253686643 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACATTG GACAATTTCA GCTTACCAAT CGTTTGATAG CAGCCCCAAT GGCTGGTATT
AGCGATCGCC CATTTAGAGC ACTCTGTCAC GCGATGGGCG CTGGAATGAC CGTGTCTGAA
ATGCTTTCTT CCAACCCGGA AGTGTGGCGT TCAGACAAGT CGCGTTTGCG AATGGTTCAT
AGCGATGAAC CGGGTATCAG AGCCGTGCAG ATTGCCGGTT GTGACCCCGA TGAGATGGCG
GCGGCAGCGA GAATCAATGC TGATTCCGGC GCGCAAATCA TTGACATCAA TATGGGCTGC
CCGGCGAAGA AGGTGAACCG CAAGATGGCA GGATCTGCAT TGTTGCAGTA TCCGGATTTG
GTCAAACAGA TCCTCTCTTC GGTGGTGAAA GCGGTAGACG TACCGGTGAC ACTGAAGATC
CGTACCGGTT GGGCACCAGA GCATCGCAAC TGTGTAGAAA TTGCCAAACT GGCTGAAGAC
TGTGGCATTC AGGCGTTAAC CATTCACGGA CGCACCCGTG CGTGCCTGTT CAATGGTTCC
GCGGAATACG ACAGCATTCG GGCAGTTAAG CAGGCCGTTT CCATTCCTAT TATTGCGAAT
GGCGACATTA CAGACCCGCA TAAAGCCAGA GCGGTTCTTG ACTACACCGG GGCTGACGCC
CTGATGATAG GACGAGCCGC TCAGGGAAGA CCCTGGATCT TTCGGGAAAT CCAGCATTAT
CTGGACACAG GGGAGTTGCT GGCACCAATG CCGTTGGCAG AGGTCAAGCG CTTGTTGATC
GAGCATATAC GGGAATTGCA CGACTTTTAT GGTCCAGGCA AGGGATTTCG TATCGCTCGT
AAGCACGTAT CCTGGTATCT CCAGGAGCAT GCCCCAAACG ACCAGTTTAG GCGCACATTC
AACGCCATTG AGGATGCCAG CGAGCAGCTG GAGGCGTTGA AGGCATATTT TGAAAATCTT
GCGTAA
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| Protein sequence | MHIGQFQLTN RLIAAPMAGI SDRPFRALCH AMGAGMTVSE MLSSNPEVWR SDKSRLRMVH
SDEPGIRAVQ IAGCDPDEMA AAARINADSG AQIIDINMGC PAKKVNRKMA GSALLQYPDL
VKQILSSVVK AVDVPVTLKI RTGWAPEHRN CVEIAKLAED CGIQALTIHG RTRACLFNGS
AEYDSIRAVK QAVSIPIIAN GDITDPHKAR AVLDYTGADA LMIGRAAQGR PWIFREIQHY
LDTGELLAPM PLAEVKRLLI EHIRELHDFY GPGKGFRIAR KHVSWYLQEH APNDQFRRTF
NAIEDASEQL EALKAYFENL A
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