Gene PC1_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0223 
Symbol 
ID8131131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp262110 
End bp262796 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content53% 
IMG OID644863499 
Producthypothetical protein 
Protein accessionYP_003015819 
Protein GI253686629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.543212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGTTA AAAGTTTAAG CAGAGGGGCG TTTTCGCCCC TTTTGCTTTT ACGACGCTGG 
TGTGGCGTAG GCCTCATGCT TACTGCTGTG GTGGCCTGTA GTAGCCGCAC CGCACCGCCG 
GAATTTTTCG CCAGCGGTTA CGTTGCCGAT CGCGGTATCG TGCGTTTGTG GCGTAAAGAC 
GATGCGCAGA ATACGACGGC GTTGACCACC GTGTTCAACC CGCTTCAGGG CAATGCGCTG 
GTGGTGACTC GCTATACGTT CCAGCAGGAC AAGCTACGCG AGATACAGCG TAATCAGCTT 
GGAACGCAAA AAGAAGATAT GCGTTTGCGC TTTGCAGAAG ATGGAACCGT CAGCTTTATG 
CAGCGGCAAC TTGCCGAAAG ACGTGAATCG GTTTCTGATG ATGATGTTGC GCTCTACCAG 
TTTGATGCTA AGCGCATGCT GGAGTTGAGC GATGTCCTGC GTGCAGGCAA GGTGATCTTA 
AAACAAGGGA AATGGCTGGA AGGCCAGGTG CAGTCTTGCG ACGGCACGGC AGTTCGCCCT 
GATTTTGACA ATGATTCGCG TGAATGGATC GCGGAGCAAA AAATGCATGC AACGCGTCCG 
CTAAATGTCG CATGGCTGGA AGCGCCGGAA GGAACACAGT TATTGCTGGT GGTGGAGGAT 
GATGTCTGCC AGTGGCAGCC TAAATAG
 
Protein sequence
MSVKSLSRGA FSPLLLLRRW CGVGLMLTAV VACSSRTAPP EFFASGYVAD RGIVRLWRKD 
DAQNTTALTT VFNPLQGNAL VVTRYTFQQD KLREIQRNQL GTQKEDMRLR FAEDGTVSFM 
QRQLAERRES VSDDDVALYQ FDAKRMLELS DVLRAGKVIL KQGKWLEGQV QSCDGTAVRP 
DFDNDSREWI AEQKMHATRP LNVAWLEAPE GTQLLLVVED DVCQWQPK