Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0216 |
Symbol | |
ID | 8131124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 255336 |
End bp | 257291 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644863492 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_003015812 |
Protein GI | 253686622 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTACAG ACCCCTTGTC TATAAACACA GTGTCGTCAA AATCGGGTCG CCGCGAGCAG CGTGCCGCCG CCCAGCAGTT TATTGAAACC TTACAGGGAA CGGCCTTTCC CAATTCCAAA CGCATTTATC TTACGGGCTC GCGCGACGAC ATCGCCGTAC CGATGCGGGA AATTCAGCTC AGCCCGACGC TACTCGGCGG CAGCAAAGAC AACCCCCAGT ACGAACCCAA TGAACCAATC CCGGTTTACG ATACGTCAGG GCCTTATGGC GACCCCGCAG CCCAACCCGA TGTCCGCATT GGCTTAGCGA AGCTGCGCGC CAGCTGGATT GCAGAACGCA GCGACACCGA GGCACTCTCT GGCGTCAGCT CCGATTTCAC CCAGCAGCGT CTGGCAGATG CGGGGCTTGA TCATCTGCGC TTTGAACACC TGCCACGGCC GCTGCGTGCC AAAGCAGGCA AACGTGTCAC CCAGCTCCAC TATGCGCGAC AGGGAATCAT TACCCCCGAA ATGGAATTTA TCGCCCTTCG CGAAAACATG GGACGCGAGC GTATTCGCAC CGACGTGCTG CGTCAGCAGC ATCCAGGGCA AAGTTTTGGC GCCCTACTGC CGGAGAACAT CACGCCGGAA TTTGTCCGTC AGGAAGTGGC CGCCGGGCGC GCCATCATCC CTTCCAACAT CAATCACCCA GAATCAGAGC CGATGATTAT CGGACGCAAT TTTCTGGTGA AGGTTAACGC CAATATTGGT AACTCCGCTG TGACATCCTC CATCGAAGAA GAGGTGGAAA AGCTGGTCTG GTCTACCCGT TGGGGCGCGG ATACGGTGAT GGATCTCTCA ACCGGCCGCT ATATTCATGA AACCCGCGAG TGGATTCTGC GTAACAGTCC CGTGCCAATC GGAACCGTAC CGATCTATCA GGCGCTGGAA AAAGTTAACG GCGTGGCGGA AAACCTGAAC TGGGAAATGT TCCGCGACAC GCTGCTGGAG CAAGCGGAAC AGGGCGTGGA CTATTTCACT ATCCACGCCG GCGTGCTGCT GCGCTACGTG CCGATGACGG CCAAACGCCT GACCGGCATC GTTTCGCGCG GTGGCTCGAT TATGGCGAAG TGGTGCCTAT CGCATCATAA AGAGAGCTTC CTGTACGAAC ACTTCCGTGA AATCTGTGAA ATCTGCGCCG CTTATGACGT CGCGCTGTCA CTGGGTGATG GTTTACGCCC CGGTTCTATT CAGGATGCTA ACGACGAAGC CCAGTTTGCC GAGCTGCATA CGCTGGGCGA GCTGACCAAA ATCGCCTGGG AATACGACGT ACAGGTGATG ATCGAAGGCC CCGGTCACGT TCCAATGCAA ATGATCCGCC GCAACATGAC CGAAGAACTG GAGCACTGCC ATGAAGCCCC GTTCTATACG CTCGGCCCGT TAACCACCGA TATCGCACCG GGTTACGATC ACTTCACCTC CGGTATTGGC GCCGCCATGA TCGGCTGGTT CGGCTGCGCG ATGCTCTGTT ACGTCACGCC GAAGGAGCAT CTTGGCTTAC CCAATAAAGA AGACGTTAAG CAGGGACTAA TTACCTACAA GATCGCCGCC CACGCCGCAG ATTTGGCAAA AGGTCATCCC GGTGCGCAGA TCCGTGATAA CGCCATGTCG AAAGCACGTT TCGAATTCCG CTGGGAAGAC CAGTTCAATC TGGCGCTCGA TCCCCAAACG GCACGCGCCT ACCACGATGA AACGCTGCCG CAGGAATCCG GAAAAGTTGC TCACTTCTGC TCTATGTGCG GTCCTAAATT CTGCTCGATG AAGATCTCAC AGGAAGTACG CGACTACGCC GCAAAACAGG AAGCGGAAGC CAAACCGATT GAAGTAGGCA TGGCACAGAT GTCGCAGGAA TTCCGCTCTC GCGGCAGTGA GCTGTATCAC AGCGCCACCA GCCTGCAAGC CGAGGAAAAC CAATGA
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Protein sequence | MSTDPLSINT VSSKSGRREQ RAAAQQFIET LQGTAFPNSK RIYLTGSRDD IAVPMREIQL SPTLLGGSKD NPQYEPNEPI PVYDTSGPYG DPAAQPDVRI GLAKLRASWI AERSDTEALS GVSSDFTQQR LADAGLDHLR FEHLPRPLRA KAGKRVTQLH YARQGIITPE MEFIALRENM GRERIRTDVL RQQHPGQSFG ALLPENITPE FVRQEVAAGR AIIPSNINHP ESEPMIIGRN FLVKVNANIG NSAVTSSIEE EVEKLVWSTR WGADTVMDLS TGRYIHETRE WILRNSPVPI GTVPIYQALE KVNGVAENLN WEMFRDTLLE QAEQGVDYFT IHAGVLLRYV PMTAKRLTGI VSRGGSIMAK WCLSHHKESF LYEHFREICE ICAAYDVALS LGDGLRPGSI QDANDEAQFA ELHTLGELTK IAWEYDVQVM IEGPGHVPMQ MIRRNMTEEL EHCHEAPFYT LGPLTTDIAP GYDHFTSGIG AAMIGWFGCA MLCYVTPKEH LGLPNKEDVK QGLITYKIAA HAADLAKGHP GAQIRDNAMS KARFEFRWED QFNLALDPQT ARAYHDETLP QESGKVAHFC SMCGPKFCSM KISQEVRDYA AKQEAEAKPI EVGMAQMSQE FRSRGSELYH SATSLQAEEN Q
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