| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0149 |
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| Symbol | |
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| ID | 8131049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 178386 |
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| End bp | 179984 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644863419 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003015747 |
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| Protein GI | 253686557 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCCA AATATCCGCT GCGGATACGC CCCGCCCCTG ATGCCTCGCT GACCGCCGCC
GCACTGTCGG CGGGATATTC TGCGTTAGTC GTGTCTCTGG TTGTGCCGCT GCTGGTGCTT
GCAGGCTGGT GGCTTGCCAG TCGTCACGGA TGGATGTCTG AACAAATCCT GCCTTCCCCA
CTGGCGGTCA TCGACAGCGC ACGGGCTTTT ATCCCCGAAG AGCTGGTTCA TCAGTTGCCC
ATCAGCCTGC TGCGGCTGGC GATTGGCTTT AGCGGGGGGA TCGCGCTGGG TCTGGTGCTC
GGTAGTCTCT TCGGTCTGAA TCGGCGGCTG AATGCGCTAT TTATGCCGTT GTTCACCGTT
ATCGCGCAGA TCCCGACGCT GGCCTGGATT CCACTCTTGA TGCTGTCACT GGGCATTGGC
GAGGCGCTGA AGCTGGTAGT GCTAGTGAAA TCGGTAACGG TGCCGGTGAC GCTCTACACG
TGTGCCGGCA TTCAACAGAC GCCGCAAAAG CTGCATGAAA TGGCACGTAG CCTGCGTTTA
CCGCCTGCCG CTTTCCTGCG CTACCTGATT CTGCCTGCGA TGCTGCCCTA TGTGATGACG
GGCGTGCGGC TGGCGTTTTC TACCGGATGG GTCGCGTTGA TTGCGGTTGA ACTGCTGGCA
TCCAGCGAAG GGTTGGGCTA TCTGCTGGTA CAAAGCCGCC AGCTGTTCAT GTTGGATTTA
GTGTTCGTCT GCATTCTGAT CATTGGAATC CTGGGATTTG CCGGAGAGCG TGTGCTGCTG
AAGCTGGAGC GTCGCTGGAT TCACTGGCCT GCACCGGTGC TGGGTCGCGA TAGCTTGGGT
TATGCGCTGC CGAGCCTGTC GCTGACGCCT TGGTTAGCGC CACTGGTACT GGTTGTGCTG
TGGCAGGTTA GTAGCACCTA CGAGTGGGTG AACGTGGCTT TCCTTCCTGC GCCGAGTCGC
GTGATCGACG CGCTGTGGAC GGGGCTGGTT CAGGGGGGAT TGCTCATCGA TCTCCATGCC
AGCCTATTGC GGGCGTTACA GGGCTTTACG CTGGGGAGTG CGATCGGCGT GCTGGTTGGA
GCGGTGCTCG GCGGCTGGCG TATTGCCGAC AGGCTGTTTA ATCCGGCGCT GTCCGCGCTG
CGTTGCGTAG CGCTATTCGC CTGGCTGCCG CTGATCACCG CCTGGTTCGG TTTAGGGGAA
AGCGCCAAAA TCGTGTTTAT CGCCGTGGCG GCATTCTTTC CCGTGATGCT GGCAACCCGT
CAGGGGATCG CCCAGCTTCC TCCTGCGCTG TTGGAAGTGG CGCAGGTGCT GCGTCTGACG
CCAGTTCAGA CGCTCCGCAC GCTAATACTG CCCAGCGTAT TGCCGCCGCT GTTTTCCGGC
CTGCGGCTGG CGTTGATGCA CGCGTGGACA GGCGCGATTG GTGCAGAGTA TTTCATGCCG
TCGGGAGAAG GGCTGGGCGG CATGATGATT CGCGCACAGC AGTTGCTTGA ATCCGACCGC
ATCATGGCGG GTGTGGTATT AATTGCTGCC GTCGCCGCGC TCTTTTCCCG GCTGATTACC
TTATCTGAGC GGCGGTTGAC CCGCTGGCGC TTTGCGTGA
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| Protein sequence | MMPKYPLRIR PAPDASLTAA ALSAGYSALV VSLVVPLLVL AGWWLASRHG WMSEQILPSP
LAVIDSARAF IPEELVHQLP ISLLRLAIGF SGGIALGLVL GSLFGLNRRL NALFMPLFTV
IAQIPTLAWI PLLMLSLGIG EALKLVVLVK SVTVPVTLYT CAGIQQTPQK LHEMARSLRL
PPAAFLRYLI LPAMLPYVMT GVRLAFSTGW VALIAVELLA SSEGLGYLLV QSRQLFMLDL
VFVCILIIGI LGFAGERVLL KLERRWIHWP APVLGRDSLG YALPSLSLTP WLAPLVLVVL
WQVSSTYEWV NVAFLPAPSR VIDALWTGLV QGGLLIDLHA SLLRALQGFT LGSAIGVLVG
AVLGGWRIAD RLFNPALSAL RCVALFAWLP LITAWFGLGE SAKIVFIAVA AFFPVMLATR
QGIAQLPPAL LEVAQVLRLT PVQTLRTLIL PSVLPPLFSG LRLALMHAWT GAIGAEYFMP
SGEGLGGMMI RAQQLLESDR IMAGVVLIAA VAALFSRLIT LSERRLTRWR FA
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