| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0138 |
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| Symbol | |
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| ID | 8131038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 164123 |
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| End bp | 165310 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863408 |
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| Product | sugar efflux transporter |
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| Protein accession | YP_003015736 |
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| Protein GI | 253686546 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.789478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGTT CTTCCCGTTC GACCGCCTGG TTACGCGTCG TCAGCCTTTC TCTGGCGGCA
TTCATTTTTA ACACCGCGGA ATTTGCCCCT GTTGCGTTGT TGTCAGATAT CGCCGCCAGC
TTTTCCATGA GCGCCGCGCA GGTTGGGCTG ATCATTACGA TTTACGCCTG GGTGGTCGGG
CTGATGTCGT TACCCTGTAT GCTGCTGTCC AGCGACATGG AACGACGTAG CCTGTTGATC
AAAATCTTTA TCCTGTTCGC CATCAGTAAT GTGCTATCCG GTCTGGCTTG GAACTATTGG
GTGCTGGTGA TCGCCCGTAT CGGTGTGGCA CTGGCTCATG CAATATTCTG GTCGATTACG
GCATCGCTGG TGGTGCGTCT GGCGCCTGCG GACAAAAAGG CGCAGGCATT AAGCCTGCTG
GCGACCGGCA CGGCGTTGGC GCTGGTGCTG GGGTTACCGC TGGGACGTGT GGTCGGTCAG
TATCTGGGGT GGCGTGTGAC GTTTGTCCTG ATTGGCCTGA TTGCTGCGGC GATTATGGTG
GGTCTGATGA AACTGCTGCC CGTGTTGCCT AGCAGCAATT CCGGTTCATT GAAGAGTTTG
CCTCTTCTGC TGAAACGTCC GGCGCTGCTG TGCGTGTACG GCCTGATCGT CATGATCGTG
ACGGCGCATT TTACCGCCTA CAGTTATATT GAGCCGTTTA TCCAGAAAGT GGCGTTGTTG
AGTGAGAACT TCACGACCAT CTTGCTATTG ATTTTTGGCG GTGCCGGAAT CATTGGTAGC
ATGCTGTTTA GCCGTTACAG CAGTAAGTAT CCGGCGGGCT TTCTGATTGT CTCTTTCGCG
TTTCTGGCGG TATGTTTGCT GTTACTGCTG CCGTTGTCAT TTAGCGGCTG GAGCCTGTCG
ACGCTGTGCA TCGTCTGGGG AATCGCCATT ATGGCGCTGA GTCTGGGTAT GCAGGTCAAA
GTGCTGACGC TGGCATCGGA TGCAACGGAT GTGGCAATGG CGCTCTATTC GGGGATTTAT
AACATTGGCA TCGGCGGCGG TGCGCTGCTG GGCAATCAGG TTATTATCCA TTTGGGCTTG
CCCGACATCG GCTTCATGGG AGCGGCGATG GCGATGCTGG CGACGGTATG CTGTATTTTG
ACGTTTGTTC GCTATTCCCG TGTGTTAAAA ACATCATTAA CGAGTTGA
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| Protein sequence | MTRSSRSTAW LRVVSLSLAA FIFNTAEFAP VALLSDIAAS FSMSAAQVGL IITIYAWVVG
LMSLPCMLLS SDMERRSLLI KIFILFAISN VLSGLAWNYW VLVIARIGVA LAHAIFWSIT
ASLVVRLAPA DKKAQALSLL ATGTALALVL GLPLGRVVGQ YLGWRVTFVL IGLIAAAIMV
GLMKLLPVLP SSNSGSLKSL PLLLKRPALL CVYGLIVMIV TAHFTAYSYI EPFIQKVALL
SENFTTILLL IFGGAGIIGS MLFSRYSSKY PAGFLIVSFA FLAVCLLLLL PLSFSGWSLS
TLCIVWGIAI MALSLGMQVK VLTLASDATD VAMALYSGIY NIGIGGGALL GNQVIIHLGL
PDIGFMGAAM AMLATVCCIL TFVRYSRVLK TSLTS
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