| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0082 |
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| Symbol | |
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| ID | 8130982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 105968 |
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| End bp | 107152 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863352 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003015680 |
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| Protein GI | 253686490 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGGCTCA GACGTTCATT AACGATTAAA CAGATGACAG CCGTGTCTGC CGTGGCATTG
GTGACGATCA GCCTGTTTAT CGTCATACAG CTCTTTCACT TCGTTCATCA ACGCCGTGAA
GATTATTCCA GACAGCTGGA GAGCATCGCC TATTCCGTGC GCCAACCACT GACAGACGCG
GTGCTGCAAG GGGAAGTTCA GCGGGCTGGT AATATTCTGG ACAGCTTATT ACCGGTTGCT
TTTCTAAGCC GGGCAGATGT GCTGCTGCCG GATGATTTCC AGACGCTGCA TGCGAATTTC
CCGAAAGAAC GTCCGGTGCC AGACTGGATC GCGCGGGTAT TCAGGCTGCC GATCCGTATT
TCTATTCCGC TCTATTCCCC GCCACAGACG CAGTATTCGG CACCGCTGGC ACATCTGGTC
TTGCAGGCGG ATTCCTACCG GATGTATCAA TTTATCGTCA GCACCTTTTC AACCATGCTG
GCAACGTACC TGCTGCTGGC GCTGATTATG TCGATCGCCA TTACCTGGTG CATGAACCGC
CTGCTGATAC ACCCGCTGCG TGGGATTATT ATCGAGTTAC AGAATCTCCC GCCGGATGCC
ATGCTGCACC GTCCGCTCAC GCTGCCGCCC TGGCATCATG ATGATGAATT GGGCGCGTTG
GTGCGCAGCT ACAACCGCAA TCAACAACTG CTGGAGCAAT CTCTTTCTGC CGGAACGGAA
GGGGTGGGGT TACCGGATAA AGCGCATTTT ATGCGACGCC TCGAACAGCG TCTGGCCGAT
GCTACTCCAT TTAGCCTGCT GGTTTTCGGG CTTGATTCCT CAGCCAGCAA GCAGGGCGAT
ATGGCCACGT TAGCTACGCA GCTTCGCGTG GTGATTGAGG AACAAAACGA GGCAGGGCTC
ACCTGTCTGG CACGTCTCGA TTGTGACGAA TTCGCTCTCA TCGGGAAAAC GCTGGGATCT
GCCGGGCAAG CACAGGACTG GGCGCAAAAC GTCATGCTGG CGATCAATCT GCCTTTTTTA
CCCGCGGACG CCCAGCCTGC ACGGGCTGTC AGCGTGGGTA TCCTCACCAT TACCGATCCT
CGGCCAGAGG CGGCGGCGCT GCTGTTGTCA CAGGCGCGTT TTGCCATGCA GCTAGCGCGG
CACGATAAGA AATGCGGTAT TCATTGCCTC ACCGTGCCTT CCTGA
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| Protein sequence | MRLRRSLTIK QMTAVSAVAL VTISLFIVIQ LFHFVHQRRE DYSRQLESIA YSVRQPLTDA
VLQGEVQRAG NILDSLLPVA FLSRADVLLP DDFQTLHANF PKERPVPDWI ARVFRLPIRI
SIPLYSPPQT QYSAPLAHLV LQADSYRMYQ FIVSTFSTML ATYLLLALIM SIAITWCMNR
LLIHPLRGII IELQNLPPDA MLHRPLTLPP WHHDDELGAL VRSYNRNQQL LEQSLSAGTE
GVGLPDKAHF MRRLEQRLAD ATPFSLLVFG LDSSASKQGD MATLATQLRV VIEEQNEAGL
TCLARLDCDE FALIGKTLGS AGQAQDWAQN VMLAINLPFL PADAQPARAV SVGILTITDP
RPEAAALLLS QARFAMQLAR HDKKCGIHCL TVPS
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