| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0044 |
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| Symbol | |
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| ID | 8130944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 49825 |
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| End bp | 51432 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644863315 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003015643 |
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| Protein GI | 253686453 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGT CCCTGGTTAA GTCAAGGGTG TTGAAGTTCG GTCTTGGCTT GCTCGCCATG
TCCGTCGCTG CAGGCGTTCA GGCAAAAACG CTGGTTTACT GCTCAGAAGG CTCCCCGGAA
GGTTTTAACC CACAGCTGTT CACATCTGGT ACGACGTTTG ATGCCAGCTC TATTCCTATT
TATAACCGTC TGGTGGAATT TAAAGACGGC ACCACGGACA CCAGTCCTGG GCTGGCTGAA
AAATGGGATA TTAGCGAAGA CGGCAAAACC TATACCTTCC ATCTGCGCAA AGGCGTGAAA
TGGCAGGACA GCAAGGATTT CAAACCTTCC CGTGAATTCA ATGCCGATGA CGTGATTTTC
TCTTTCATGC GTCAGCAGGA TGCCAACCAT CCGTACCATA AAGTGTCTGG CGGCAGCTAC
GAATACTATC AGGGTATGGG CATGCCAGAG CTGGTCAGCA AAATCGAAAA AGTTGACGAC
TACACGGTCC GCTTTGTGCT GAACCGTCCT GAAGCGCCGT TCCTGGCAAA CCTGGCGATG
GACTTCGCTT CCATCCTGTC AGCAGAATAC GCGGATCAGA TGCTGAAAGC CGGTACACCG
GAGAAAATTG ACCTGAACCC AATCGGTACG GGCCCGTTCC AGCTACAGCA GTACCAGAAA
GATTCCCGCA TTTTGTACAA AGCTTTTGAA GGCTATTGGG GCAGCAAGCC GGGCGTTGAC
CGTCTGGTCT TCTCCATCAC GCCAGATGCT TCCGTACGTT ACGCCAAGCT GCAAAAAGAT
GAATGCCAGA TCATGCCGTA TCCAAATCCG GCCGATCTCG CGAAGATGAA AGAAGATAAG
AACATCACGT TGATGGAACA GCCTGGCCTG AACGTTGGCT ATCTGGCTTA CAACGTTGAG
AAAAAACCGC TGGATAACGT CAAGATTCGC CAGGCGCTGA ACTATGCGGT TAACAAGACT
GCCATTATCG AAGCGGTCTA TCAGGGGGCC GGCCAAGCCG CAACTAACCT GATCCCGCCG
ACCATGTGGG GCTACAACAA CGACGTTAAA GACTACAGCT ACGATCCTGA GAAAGCGAAA
GCACTGCTGA AAGAAGCGGG TATGGCTGAC GGTTTCTCTA TCGACCTGTG GGCAATGCCG
GTACAGCGTC CGTATAACCC GAACGCGCGT CGTATGGCGG AAATGATTCA GTCCGACTGG
GCGAAAGTTG GCGTGAAAGC CAAGATCGTC ACCTACGAGT GGGGCGAGTA TCTGAAGCGT
GCGAAAGACG GCGAGCACCA GACCGTGCTG ATGGGCTGGA CAGGCGACAA TGGGGATCCA
GATAACTTCT TCGCGACCCT GTTCAGCTGC GATGCGGCTA AAAATGGTTC CAACTACTCC
AAGTGGTGCT ACAAGCCGTT TGAAGATCTG ATCCAACCGG CGCGCGCCGT TTCCGATCAC
GAAAAACGTA TTGAACTGTA CAAGCAGGCA CAGGTTGTGA TGCACGATCA GGCTCCGGCG
CTGATTGTCG CGCACTCTAC CGTGTACGAA CCTGTACGTA AAAACGTGAA AGGCTATGTG
GTTCAGCCGC GTGGTGTGCA TAGCTTCAAC AACGTGACGT TGGATTAA
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| Protein sequence | MEKSLVKSRV LKFGLGLLAM SVAAGVQAKT LVYCSEGSPE GFNPQLFTSG TTFDASSIPI
YNRLVEFKDG TTDTSPGLAE KWDISEDGKT YTFHLRKGVK WQDSKDFKPS REFNADDVIF
SFMRQQDANH PYHKVSGGSY EYYQGMGMPE LVSKIEKVDD YTVRFVLNRP EAPFLANLAM
DFASILSAEY ADQMLKAGTP EKIDLNPIGT GPFQLQQYQK DSRILYKAFE GYWGSKPGVD
RLVFSITPDA SVRYAKLQKD ECQIMPYPNP ADLAKMKEDK NITLMEQPGL NVGYLAYNVE
KKPLDNVKIR QALNYAVNKT AIIEAVYQGA GQAATNLIPP TMWGYNNDVK DYSYDPEKAK
ALLKEAGMAD GFSIDLWAMP VQRPYNPNAR RMAEMIQSDW AKVGVKAKIV TYEWGEYLKR
AKDGEHQTVL MGWTGDNGDP DNFFATLFSC DAAKNGSNYS KWCYKPFEDL IQPARAVSDH
EKRIELYKQA QVVMHDQAPA LIVAHSTVYE PVRKNVKGYV VQPRGVHSFN NVTLD
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