Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_73160 |
Symbol | |
ID | 4385276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 6515098 |
End bp | 6516303 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639328497 |
Product | putative permease |
Protein accession | YP_794026 |
Protein GI | 116053699 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.591701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGA AAATTTCCCC GCCTTCACAG AAGCTCGACG GCCTGTTCCT GCTGGCCCTG TCGATGGCCG TGTTCTTCGT CGGCGTGACC GAGTTCATGC TGTCCTCCAT GCTCGGGCCG CTGGCGCAGG CGTTCCACAC CACTACCAGC GGCGCCGCCT GGCTGATCTC CAGCTACGCG TTCTCCTATG CGATCGCCGC GCCGTTGCTG GGCTACTTCT CCGACCGCAT GCAACGCAGG AAGCTGCTGC TGCTCGCCCT GATCCTCTTC GCCGTCGATA CCCTGGCCAT CGTCATCGCC CCGACCCTGG AAATTGCCGT TGTCCTGCGG GTAATCGGGG GCATCGCCTC GGCAATCATC ATTCCGACCA CCTTCGCCCT GGTCGCGGAG GTGGTCGCCC CGCAAAGACA GGCCGGTGCC ATGGGCCAGG TGATGCTCGG CATGACCCTC GGCATTGCCG CCGGCCCGGC ACTGGCCGGC CTCCTCTCGG ACTTCTTCGG CTGGGCGACG CCCTTCCTGA TGGTCTCGTG CGGTTGCGTG CTGGTCTTCC TGATGGCGCG CCAGCGCCTT CCCGTGCAAG CCGTGGCACC GCGCGCCGAG GGCCACGCGC TGGGCTGGTG CAGGCAATGG AGCATCCTCA GGCCACTGAT CGCCAAGGGT GCCTGGAACG GCACCGGGGT CGCCGGCCTG CTTCTCTCGG GAGAGGTGCT GCGCCAGCGC TACGGCTTCA GCACCGCGCA GATAGGCATC AGCATCGCCG CCTTCGGCGT GGGCCTGGCC GTGGGGAACC TCGCCGCGGG TTACCTGCGG CGCTACCTGA AGCGCGACGA AGACATGCTC CTGCTGGTGC TGGCGCTCCT GGTGCTATCG ATGTCGACCT TCATGCTCCT GCCGCTACCG TTGCCCGTGG CGCTCTTCTG CCTGGGCGCC TGGGGCGCCG CGCTGGGCCT GGGCGCGCCG GCGGGCACGG TGGTACTCGC CTCGCGCTCC GGGCCGGACA AGGGCATGGT GCTGTCGTTC GCCGAGACGT TCAACAACAT CGCCATTCTC GCCAGCGTGC CCCTGGCTGT GCGACTGCTG GAGCTGAAGG GGCCGCCCGC CACCCTGTGG GTATTGGGCA TCGGCCTGGG GATCGGCGCC TGGTTCACCG TGCTGGACTG GTTCGCCAGC CGCAGGAGCG ACGAGGCGCT GCCGTTGCGC GATTGA
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Protein sequence | MNQKISPPSQ KLDGLFLLAL SMAVFFVGVT EFMLSSMLGP LAQAFHTTTS GAAWLISSYA FSYAIAAPLL GYFSDRMQRR KLLLLALILF AVDTLAIVIA PTLEIAVVLR VIGGIASAII IPTTFALVAE VVAPQRQAGA MGQVMLGMTL GIAAGPALAG LLSDFFGWAT PFLMVSCGCV LVFLMARQRL PVQAVAPRAE GHALGWCRQW SILRPLIAKG AWNGTGVAGL LLSGEVLRQR YGFSTAQIGI SIAAFGVGLA VGNLAAGYLR RYLKRDEDML LLVLALLVLS MSTFMLLPLP LPVALFCLGA WGAALGLGAP AGTVVLASRS GPDKGMVLSF AETFNNIAIL ASVPLAVRLL ELKGPPATLW VLGIGLGIGA WFTVLDWFAS RRSDEALPLR D
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