Gene PA14_72200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_72200 
SymbolprfH 
ID4385003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6431866 
End bp6432480 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content73% 
IMG OID639328418 
Productpeptide chain release factor-like protein 
Protein accessionYP_793947 
Protein GI116053620 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR03072] putative peptide chain release factor H 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC TGCAACTCTC CGCGGCCCAG GGCCCGGCGG AATGCTGCCT GGCGGTGGCG 
AAGGCGTTCG AGCGGCTGTG CCTCGAGGCG GCGCAAGCCG GCGTCGAGGT CGAGGTGCTC
GAGGAGGTGG CCGGCGAGCG TCCGCGCACC TGGCGTTCGC TGCTCCTGGG GCTGCGCGGC
ATTGCCGCCG AAGCGCTCGC CGAGCACTGG TGCGGCGGTA TCCAGTGGAT CTGCACCAGT
CCCTACCGGG CGAGGCATGC GCGCAAGAAC TGGTTCATCG GCGCGGAGCG CTTCGCCGCG
CCGCCGGCCA GCCTGGAGGG CGAGATCCGT TTCGAGACCC TGCGCTCTTC CGGCCCCGGC
GGCCAGCATG TCAACACCAC CGACTCGGCG GTGCGCGCCA CCCACCTGGC CAGCGGCATC
AGCGTCAGGG TGCAGAGCCA GCGTAGCCAG CACGCCAACA AACGCCTGGC GATCCTGCTG
ATCGCCCGGC GCCTCGCGGA CCAGGCGAGC AGCGCGGCCG ACGCGCTGCG CGCGGAGCGC
CGCCAGGCCC ACGGCCGGAT CAGTCGCGGC GCGGCTCGCC GGGTATTCCG CGGCGAGCGT
TTCGAGCCGG CCTGA
 
Protein sequence
MILLQLSAAQ GPAECCLAVA KAFERLCLEA AQAGVEVEVL EEVAGERPRT WRSLLLGLRG 
IAAEALAEHW CGGIQWICTS PYRARHARKN WFIGAERFAA PPASLEGEIR FETLRSSGPG
GQHVNTTDSA VRATHLASGI SVRVQSQRSQ HANKRLAILL IARRLADQAS SAADALRAER
RQAHGRISRG AARRVFRGER FEPA