| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_69470 |
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| Symbol | algR |
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| ID | 4384483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 6194758 |
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| End bp | 6195504 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639328200 |
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| Product | alginate biosynthesis regulatory protein AlgR |
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| Protein accession | YP_793734 |
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| Protein GI | 116053409 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.184834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGTCC TGATTGTCGA TGACGAACCT CTGGCGCGAG AGCGCCTGGC CCGATTGGTA
GGGCAACTGG ACGGCTATCG CGTCCTCGAG CCCTCGGCCA GCAATGGCGA AGAAGCGCTG
ACGCTGATCG ACAGCCTCAA GCCCGATATC GTCCTGCTGG ATATCCGCAT GCCCGGTCTG
GACGGCCTCC AGGTCGCGGC CAGACTCTGC GAGCGGGAAG CGCCGCCGGC TGTGATCTTC
TGCACGGCCC ATGACGAATT CGCCCTGGAA GCCTTCCAGG TCAGCGCCGT GGGCTACCTG
GTCAAGCCGG TGCGCAGCGA AGACCTGGCC GAGGCGTTGA AGAAAGCCTC GCGACCGAAC
CGCGTGCAAC TGGCCGCGCT GACCAAGCCC CCGGCCTCCG GCGGCAGCGG TCCGCGCAGC
CACATCAGTG CGCGGACCCG CAAGGGGATC GAGCTGATCC CGCTGGAAGA GGTGATCTTC
TTCATTGCCG ACCACAAGTA CGTGACCTTG CGTCATGCGC AGGGCGAGGT GCTGCTGGAC
GAGCCGTTGA AGGCGCTGGA AGACGAGTTC GGCGAGCGCT TCGTGCGCAT CCACCGCAAC
GCGCTGGTCG CCCGCGAACG GATCGAACGC CTGCAGCGTA CGCCGCTGGG GCATTTCCAG
CTCTACCTGA AAGGCCTCGA CGGCGATGCA CTGACCGTCA GCCGGCGGCA CGTGGCCGGG
GTCAGGCGTC TGATGCATCA GCTCTGA
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| Protein sequence | MNVLIVDDEP LARERLARLV GQLDGYRVLE PSASNGEEAL TLIDSLKPDI VLLDIRMPGL
DGLQVAARLC EREAPPAVIF CTAHDEFALE AFQVSAVGYL VKPVRSEDLA EALKKASRPN
RVQLAALTKP PASGGSGPRS HISARTRKGI ELIPLEEVIF FIADHKYVTL RHAQGEVLLD
EPLKALEDEF GERFVRIHRN ALVARERIER LQRTPLGHFQ LYLKGLDGDA LTVSRRHVAG
VRRLMHQL
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